BacMap

Definition	Acinetobacter sp. ADP1 chromosome, complete genome.
Accession	NC_005966
Length	3,598,621

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The map label for this gene is ydfG [C]

Identifier: 50085024

GI number: 50085024

Start: 1875793

End: 1876542

Strand: Reverse

Name: ydfG [C]

Synonym: ACIAD1883

Alternate gene names: 50085024

Gene position: 1876542-1875793 (Counterclockwise)

Preceding gene: 50085025

Following gene: 50085023

Centisome position: 52.15

GC content: 40.67

Gene sequence:

>750_bases
ATGACCATGACGAAAACAATTTTAATTACTGGGGCAAGCTCAGGCCTAGGCGCAGGTATGGCAAAAGAATTTGCCAAGAA
AGGCTATAATTTAGCAATTTGTGCGAGGCGATTAGAACGCTTAGAGACATTAAAAACCGAATTAGAACGTCACTACGATG
TTAAAATTATCGCTAAATCACTGGATGTCACAAATTACGACCAAGTCTTTGAGGTTTTTAACGCATTTGAACAAGAGTTT
GGGCAATTAGATCGTATCATTGTCAATGCTGGTATTGGTGAAGGTAGACGAGTCGGTAAAGGGCATTTTGATATAAATCG
TAAAACGGCCGAAACCAATTTTATTTCTGCTTTAGCACAGTGTGAAGCAGCTGTTGAAATATTCCGTAAACAAAATTCGG
GACATTTAGTAGTAATCTCGTCCATGAGTGCGATGCGTGGTTTACCTAAACATTTATCCACTTATGCTGCGAGCAAGGCA
GGTGTAGCACATCTGGCTGAGGGAATTCGTGCCGAACTGATTGACACGCCCATCAAGGTTTCTACAATTTTTCCAGGCTA
TATTCGTACCGAGCTGAACCAAGGTGCCAAGCAGCTTCCTTTTGAAATCGATGAACAGACAGGGGCACGGTTACTGGTTA
AAGCAATTGAAAAGGAACCTGTAAAAGCTTATGTACCACAATGGCCATGGTTACCGATTGGAATTGCCATGAAAGTCTTA
CCTTTAAAATTAGTCAATAAATTGAGTTAA

Upstream 100 bases:

>100_bases
TTAAGACTGGTAGGGAATGAGCCACAACTTTTAAGCTTGAATGAACATCATTTTATAAAAGTAGTAAATCCAGCATTACT
GACATGGATATAAAGGAACA

Downstream 100 bases:

>100_bases
AATGATTGACATAGAATCTCATCCTTTAGAACCGTTTTTACCATCAAATGCGCGTTTGCTCATGCTAGGGAGTTTTCCAC
CGCCTAAAGAGCGTTGGAAA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTMTKTILITGASSGLGAGMAKEFAKKGYNLAICARRLERLETLKTELERHYDVKIIAKSLDVTNYDQVFEVFNAFEQEF
GQLDRIIVNAGIGEGRRVGKGHFDINRKTAETNFISALAQCEAAVEIFRKQNSGHLVVISSMSAMRGLPKHLSTYAASKA
GVAHLAEGIRAELIDTPIKVSTIFPGYIRTELNQGAKQLPFEIDEQTGARLLVKAIEKEPVKAYVPQWPWLPIGIAMKVL
PLKLVNKLS

Sequences:

>Translated_249_residues
MTMTKTILITGASSGLGAGMAKEFAKKGYNLAICARRLERLETLKTELERHYDVKIIAKSLDVTNYDQVFEVFNAFEQEF
GQLDRIIVNAGIGEGRRVGKGHFDINRKTAETNFISALAQCEAAVEIFRKQNSGHLVVISSMSAMRGLPKHLSTYAASKA
GVAHLAEGIRAELIDTPIKVSTIFPGYIRTELNQGAKQLPFEIDEQTGARLLVKAIEKEPVKAYVPQWPWLPIGIAMKVL
PLKLVNKLS
>Mature_248_residues
TMTKTILITGASSGLGAGMAKEFAKKGYNLAICARRLERLETLKTELERHYDVKIIAKSLDVTNYDQVFEVFNAFEQEFG
QLDRIIVNAGIGEGRRVGKGHFDINRKTAETNFISALAQCEAAVEIFRKQNSGHLVVISSMSAMRGLPKHLSTYAASKAG
VAHLAEGIRAELIDTPIKVSTIFPGYIRTELNQGAKQLPFEIDEQTGARLLVKAIEKEPVKAYVPQWPWLPIGIAMKVLP
LKLVNKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=32.8205128205128, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI7706318, Length=255, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI109715829, Length=192, Percent_Identity=30.7291666666667, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI40254992, Length=196, Percent_Identity=26.530612244898, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI310128830, Length=251, Percent_Identity=29.0836653386454, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI310115468, Length=251, Percent_Identity=29.0836653386454, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI40807363, Length=246, Percent_Identity=28.4552845528455, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI31542939, Length=225, Percent_Identity=25.7777777777778, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI157739938, Length=193, Percent_Identity=26.4248704663212, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=28.2722513089005, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4503817, Length=183, Percent_Identity=25.1366120218579, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI31543615, Length=227, Percent_Identity=23.7885462555066, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI210032110, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI19923817, Length=197, Percent_Identity=24.8730964467005, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=28.4153005464481, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790717, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI2367175, Length=207, Percent_Identity=27.0531400966184, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=202, Percent_Identity=29.7029702970297, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789208, Length=214, Percent_Identity=27.5700934579439, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI87082160, Length=199, Percent_Identity=27.6381909547739, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17567345, Length=234, Percent_Identity=28.6324786324786, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203115, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=242, Percent_Identity=30.1652892561983, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17507613, Length=230, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=230, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71997402, Length=190, Percent_Identity=29.4736842105263, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=249, Percent_Identity=23.6947791164659, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=200, Percent_Identity=30.5, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=253, Percent_Identity=24.901185770751, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17570069, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=206, Percent_Identity=29.6116504854369, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=250, Percent_Identity=26.8, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=27.0408163265306, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=35.0515463917526, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322227, Length=203, Percent_Identity=25.615763546798, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358495, Length=234, Percent_Identity=30.7692307692308, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI116007236, Length=194, Percent_Identity=31.9587628865979, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24641232, Length=217, Percent_Identity=30.4147465437788, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28571387, Length=197, Percent_Identity=31.9796954314721, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI116007238, Length=180, Percent_Identity=30.5555555555556, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24663911, Length=198, Percent_Identity=29.7979797979798, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648693, Length=200, Percent_Identity=28, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355889, Length=200, Percent_Identity=28, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24641388, Length=203, Percent_Identity=29.064039408867, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24648944, Length=208, Percent_Identity=29.8076923076923, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI116007234, Length=207, Percent_Identity=27.0531400966184, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24644339, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281364494, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357041, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24580925, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24649181, Length=199, Percent_Identity=27.1356783919598, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28571526, Length=208, Percent_Identity=28.3653846153846, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=26.5625, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI23397609, Length=223, Percent_Identity=28.6995515695067, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27498; Mature: 27367

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTKTILITGASSGLGAGMAKEFAKKGYNLAICARRLERLETLKTELERHYDVKIIAKS
CCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
LDVTNYDQVFEVFNAFEQEFGQLDRIIVNAGIGEGRRVGKGHFDINRKTAETNFISALAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CEAAVEIFRKQNSGHLVVISSMSAMRGLPKHLSTYAASKAGVAHLAEGIRAELIDTPIKV
HHHHHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEE
STIFPGYIRTELNQGAKQLPFEIDEQTGARLLVKAIEKEPVKAYVPQWPWLPIGIAMKVL
EEECCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHH
PLKLVNKLS
HHHHHHHCC
>Mature Secondary Structure 
TMTKTILITGASSGLGAGMAKEFAKKGYNLAICARRLERLETLKTELERHYDVKIIAKS
CCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
LDVTNYDQVFEVFNAFEQEFGQLDRIIVNAGIGEGRRVGKGHFDINRKTAETNFISALAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CEAAVEIFRKQNSGHLVVISSMSAMRGLPKHLSTYAASKAGVAHLAEGIRAELIDTPIKV
HHHHHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEE
STIFPGYIRTELNQGAKQLPFEIDEQTGARLLVKAIEKEPVKAYVPQWPWLPIGIAMKVL
EEECCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHH
PLKLVNKLS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]