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The map label for this gene is 50085023

Identifier: 50085023

GI number: 50085023

Start: 1875207

End: 1875791

Strand: Reverse

Name: 50085023

Synonym: ACIAD1882

Alternate gene names: NA

Gene position: 1875791-1875207 (Counterclockwise)

Preceding gene: 50085024

Following gene: 50085021

Centisome position: 52.13

GC content: 37.09

Gene sequence:

>585_bases
ATGATTGACATAGAATCTCATCCTTTAGAACCGTTTTTACCATCAAATGCGCGTTTGCTCATGCTAGGGAGTTTTCCACC
GCCTAAAGAGCGTTGGAAAATGCAATTTTATTATCCAAATTACCAAAATGATATGTGGCGGATTTTTGGTTATCTGTTCT
TTGATGATAAGAATTATTTTCTGGATTTATCAAATAAAAATTTTAATGAAGCTCTCATTCATGAGTTTTTACTGGAAAAA
GGCATTGCCATTTTTGATACTGCTGTCCAAGTCAAACGGTTGAAAGGAAATGCCTCGGATAAGTTTCTAGAAATTGTGAC
CGCTACCGATTTAAAACAACTGCTGTGTAAGATCCCCCAGTGTCATACCATCATGACAACTGGAGATAAAGCTACAGATA
CATTGATGCTTTCATTCTCACCAGAAACACAAAAACCGCAAATTGGACAGATTGCACATACCAATTTTGCAGGAAGAGCA
TTGGATTTGTACCGTATGCCATCTTCTTCACGAGCGTATCCACTTGCACTTGAGAAAAAAGCCGAAGCTTATGCAGTGTT
ATTTAAAAATCTGGGATTTTTATGA

Upstream 100 bases:

>100_bases
AAGGAACCTGTAAAAGCTTATGTACCACAATGGCCATGGTTACCGATTGGAATTGCCATGAAAGTCTTACCTTTAAAATT
AGTCAATAAATTGAGTTAAA

Downstream 100 bases:

>100_bases
GTTCACTACATCATCCATTCAATGGGTAAATATGACACAGCTTTCATCATAAAACGCTGAAATCTGGTGGTTTCTGGATC
ATGATGATATTCGATGGTTT

Product: G:T/U mismatch-specific DNA glycosylase

Products: NA

Alternate protein names: GT/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIDIESHPLEPFLPSNARLLMLGSFPPPKERWKMQFYYPNYQNDMWRIFGYLFFDDKNYFLDLSNKNFNEALIHEFLLEK
GIAIFDTAVQVKRLKGNASDKFLEIVTATDLKQLLCKIPQCHTIMTTGDKATDTLMLSFSPETQKPQIGQIAHTNFAGRA
LDLYRMPSSSRAYPLALEKKAEAYAVLFKNLGFL

Sequences:

>Translated_194_residues
MIDIESHPLEPFLPSNARLLMLGSFPPPKERWKMQFYYPNYQNDMWRIFGYLFFDDKNYFLDLSNKNFNEALIHEFLLEK
GIAIFDTAVQVKRLKGNASDKFLEIVTATDLKQLLCKIPQCHTIMTTGDKATDTLMLSFSPETQKPQIGQIAHTNFAGRA
LDLYRMPSSSRAYPLALEKKAEAYAVLFKNLGFL
>Mature_194_residues
MIDIESHPLEPFLPSNARLLMLGSFPPPKERWKMQFYYPNYQNDMWRIFGYLFFDDKNYFLDLSNKNFNEALIHEFLLEK
GIAIFDTAVQVKRLKGNASDKFLEIVTATDLKQLLCKIPQCHTIMTTGDKATDTLMLSFSPETQKPQIGQIAHTNFAGRA
LDLYRMPSSSRAYPLALEKKAEAYAVLFKNLGFL

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22356; Mature: 22356

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIESHPLEPFLPSNARLLMLGSFPPPKERWKMQFYYPNYQNDMWRIFGYLFFDDKNYF
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCCCEEEEEEEEECCCCEE
LDLSNKNFNEALIHEFLLEKGIAIFDTAVQVKRLKGNASDKFLEIVTATDLKQLLCKIPQ
EEECCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCC
CHTIMTTGDKATDTLMLSFSPETQKPQIGQIAHTNFAGRALDLYRMPSSSRAYPLALEKK
CCEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEECCC
AEAYAVLFKNLGFL
HHHHHHHHHHCCCC
>Mature Secondary Structure
MIDIESHPLEPFLPSNARLLMLGSFPPPKERWKMQFYYPNYQNDMWRIFGYLFFDDKNYF
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCCCEEEEEEEEECCCCEE
LDLSNKNFNEALIHEFLLEKGIAIFDTAVQVKRLKGNASDKFLEIVTATDLKQLLCKIPQ
EEECCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCC
CHTIMTTGDKATDTLMLSFSPETQKPQIGQIAHTNFAGRALDLYRMPSSSRAYPLALEKK
CCEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEECCC
AEAYAVLFKNLGFL
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA