| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is 50084486
Identifier: 50084486
GI number: 50084486
Start: 1305798
End: 1308221
Strand: Direct
Name: 50084486
Synonym: ACIAD1303
Alternate gene names: NA
Gene position: 1305798-1308221 (Clockwise)
Preceding gene: 50084484
Following gene: 50084488
Centisome position: 36.29
GC content: 39.81
Gene sequence:
>2424_bases ATGAAGGTTTCTAAACTGAATTTATTAAGTCTATCCCTGTTATGTGTTGGGGCATTGTCTACGTCATCTTCTATTTATGC GCAGTTGATGTTTAGCCAATATATTGATGGCAGCAGTAATCGAAAAGGTCTTGAGATTTATAATCCTGACAATAGTTCTG TTAATTTGTCAGATTATGAAGTACAGCAATTTAATAATGGAGGTACAGCCAAATCTTTAACTGTGAGTTTGCAGGGAAAT CTGGCAAGTAAACAAAAATTTGTGATTGGCCGTTCAGAATTACAGGCAGAGCTTGGGGCAAAGGTAAATCAGGTTGCAGG ATTATCTTTTAATGGTGATGATGCGATTGTACTGTTGTATCGAGGTGTTGCGGTCGACCGTTTTGGTCGGATTGGAGAAC GTCCTGAAAAAGGGTGGGGTAATGCAGTTTCAAGTATCGGTAATAGTTTTAAACGAATTCAGACTGAAAATTCTGCGTTA AGTATTGATGCTACCGCCGCTTTTGATCTAGACCAGTCATGGGCAGCTTGGTCAAATCGTAATGATTTTTCTAATATTCA AACCACCGCAACGCCACCTGCCACTGAAGCTGTGAGTTGTTCTAGCCAAGACACTCCTATTGCAGATCTTCAAAGCGCGG CACAAAATCAGTATTACACTGTTCGAGGTATTATCACAGCCGATTATCGTTACAGTAACGGTTTTTCTGGCTTTTATATT CAAACACCAGATAGTCAAGCCAAAGCTGGTTTAAGTAATGCGATCTTTGTCTATATTCCTGCAAGTAGTCAGATCAAAGG TGGTGAGGTTGGTCAGGAGGTGATTCTTCGAGGACGTTTAACGACGTATCAAAATCAAAAACAGATTGATCAGCTCTCGC AAGATATCAAGACCTGTAATACTGCTGCCCAAAACCAAATCCAGCCACAGATCATTCAGTTGCCTTTTACAGCTTTAACA GGAAACGAAGGTCATGTTCCTCAGCGTTATCAGGGGATGCTCGTCAAGTTTGCACAGAATTTGACAGTGAGTGAAAATTA TAATTATGGTCGATTTGGAGAATTATCTCTAAGCTTGGGCCGCTTATATATTCCAACCAATTTATACCCTGCAAACTCAA GTGATGCAAAAGCATTAGCACAGAAAAACCTGCTCTCCAGGATTATTCTGGACGATGGCTATAATAATCAAAATAGAACG CCTTGGTTGCCTCAAAATTTTAGTGCTGCACATACACTTAGATCGGGTTATCAACTGAAAAATGTAGAAGGGATTCTGGA ATACCGATTTAACAGTTGGCGCATTCAGCCCATTCCAAACCAACATAATATTCAAATTGTTGAAGATACAAACCCTCGTC AAACTATAGCAGCAAAAAATGGCCAGAATATTCGTGTTGCGGCATTTAATGTACTCAATTATGACAATGGAGCAGAAAAG GGTTTTCCAACGGATCGTGGTGCAACAACAGCAACAGAATTTAGTCGTCAACATCAGAAAATTGTCACTGCATTAAAAGC AATTAATGCTGATGTATACGGATTAATGGAAATAGCAAACAATGGTTATGATGAAAAAAGTGCAATTGCTTATCTGACCA AATCTCTTGGCCCAGACTGGAAATATATTACTCCACCTAATATGAATCGACTGGGTTCAGATGTCATCGCTGTTGGAATA TTATATAACGCCAAACGTGTCAAACCCGTTAATGCGGCGGTTGTTTTTGATGATCAGAGTCAAAAAAATCGTGTGACCAT GGCACAGACATTTCAACCGATTCATGGTGGTAAGTTCTTTACCGTCATTCCAAACCATTTGAAATCTAAAGGGAGCTGTC CTGAGGATACAGCCTCAACTGATGCAGATCAGTTGGATGGCCAAGGATGCTGGAACCCAACACGGGTTAAAGCAGTTGAA CAATTGATTCAGTGGGCAGCAAAAAATCCAACACGCGTTCAGCAGCCAAATATTCTATTTCTGGGTGATATGAATAGTTA TGCCAAAGAAGATCCAATTTTAGCTTTTGAAAAAGCCAATTATAAAGTTTTATTAAACGATGAAAAAATCGGTCAGGGTA AACAGGCATATAGCTACGTATTTGGTGTTTCCAGTAATGCGTTAGGCTATGGTGGTGCAGGCAATATTGATCATGCAATT GCAGATTCAAATCTGTATCGTTTTGTAAAACGTGCATTTGTGTGGCATATCAATGCAGATGAGCCTACCGCACTTGATTA TAATGAAGAATATAAAACGGACGAGCAAAAAACATTATTTTATGCAGATGATGCTTATCGCTCATCTGACCATGACCCAG TAATCGTCGATCTGGACTTGAAAGAAAGTGCGCAGCAAGGCGGCGTACTGAATTTTATTCAGCAACTGTTAGACTGGATT GCTCAACTTTTTACCCGTACTTGA
Upstream 100 bases:
>100_bases TTTCTGATGCAGTCATATAGATCAACTTTCATTTTTTCTTCATGTGCTTGTCATTTTGATTATCTACTCTAGATAAAAAT TAAATAAAAGGCTAAAAACT
Downstream 100 bases:
>100_bases GTTTTTAACAAATTTTGAGTGTGTTCATTCATATTTTGAACAAATACACAGGAATATCACTTGCAAGGGAAATTCTTTTT TATTAATAGTAGAGTGATAA
Product: extracellular nuclease
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; 5-Nucleotidase Domain-Containing Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease I; PKD Domain-Containing Protein; Exported Nuclease; Extracellular Nuclease-Like; Endonuclease/Exonuclease/PhosphataseEndonuclease I; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Outer Membrane Adhesin Like Proteiin; Extracellular Ribonuclease; LPXTG-Motif Cell Wall Anchor Domain Protein; DNA/RNA Non-Specific Endonuclease; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein; Calcineurin-Like Phosphoesterase
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKVSKLNLLSLSLLCVGALSTSSSIYAQLMFSQYIDGSSNRKGLEIYNPDNSSVNLSDYEVQQFNNGGTAKSLTVSLQGN LASKQKFVIGRSELQAELGAKVNQVAGLSFNGDDAIVLLYRGVAVDRFGRIGERPEKGWGNAVSSIGNSFKRIQTENSAL SIDATAAFDLDQSWAAWSNRNDFSNIQTTATPPATEAVSCSSQDTPIADLQSAAQNQYYTVRGIITADYRYSNGFSGFYI QTPDSQAKAGLSNAIFVYIPASSQIKGGEVGQEVILRGRLTTYQNQKQIDQLSQDIKTCNTAAQNQIQPQIIQLPFTALT GNEGHVPQRYQGMLVKFAQNLTVSENYNYGRFGELSLSLGRLYIPTNLYPANSSDAKALAQKNLLSRIILDDGYNNQNRT PWLPQNFSAAHTLRSGYQLKNVEGILEYRFNSWRIQPIPNQHNIQIVEDTNPRQTIAAKNGQNIRVAAFNVLNYDNGAEK GFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIANNGYDEKSAIAYLTKSLGPDWKYITPPNMNRLGSDVIAVGI LYNAKRVKPVNAAVVFDDQSQKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTRVKAVE QLIQWAAKNPTRVQQPNILFLGDMNSYAKEDPILAFEKANYKVLLNDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAI ADSNLYRFVKRAFVWHINADEPTALDYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDLKESAQQGGVLNFIQQLLDWI AQLFTRT
Sequences:
>Translated_807_residues MKVSKLNLLSLSLLCVGALSTSSSIYAQLMFSQYIDGSSNRKGLEIYNPDNSSVNLSDYEVQQFNNGGTAKSLTVSLQGN LASKQKFVIGRSELQAELGAKVNQVAGLSFNGDDAIVLLYRGVAVDRFGRIGERPEKGWGNAVSSIGNSFKRIQTENSAL SIDATAAFDLDQSWAAWSNRNDFSNIQTTATPPATEAVSCSSQDTPIADLQSAAQNQYYTVRGIITADYRYSNGFSGFYI QTPDSQAKAGLSNAIFVYIPASSQIKGGEVGQEVILRGRLTTYQNQKQIDQLSQDIKTCNTAAQNQIQPQIIQLPFTALT GNEGHVPQRYQGMLVKFAQNLTVSENYNYGRFGELSLSLGRLYIPTNLYPANSSDAKALAQKNLLSRIILDDGYNNQNRT PWLPQNFSAAHTLRSGYQLKNVEGILEYRFNSWRIQPIPNQHNIQIVEDTNPRQTIAAKNGQNIRVAAFNVLNYDNGAEK GFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIANNGYDEKSAIAYLTKSLGPDWKYITPPNMNRLGSDVIAVGI LYNAKRVKPVNAAVVFDDQSQKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTRVKAVE QLIQWAAKNPTRVQQPNILFLGDMNSYAKEDPILAFEKANYKVLLNDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAI ADSNLYRFVKRAFVWHINADEPTALDYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDLKESAQQGGVLNFIQQLLDWI AQLFTRT >Mature_807_residues MKVSKLNLLSLSLLCVGALSTSSSIYAQLMFSQYIDGSSNRKGLEIYNPDNSSVNLSDYEVQQFNNGGTAKSLTVSLQGN LASKQKFVIGRSELQAELGAKVNQVAGLSFNGDDAIVLLYRGVAVDRFGRIGERPEKGWGNAVSSIGNSFKRIQTENSAL SIDATAAFDLDQSWAAWSNRNDFSNIQTTATPPATEAVSCSSQDTPIADLQSAAQNQYYTVRGIITADYRYSNGFSGFYI QTPDSQAKAGLSNAIFVYIPASSQIKGGEVGQEVILRGRLTTYQNQKQIDQLSQDIKTCNTAAQNQIQPQIIQLPFTALT GNEGHVPQRYQGMLVKFAQNLTVSENYNYGRFGELSLSLGRLYIPTNLYPANSSDAKALAQKNLLSRIILDDGYNNQNRT PWLPQNFSAAHTLRSGYQLKNVEGILEYRFNSWRIQPIPNQHNIQIVEDTNPRQTIAAKNGQNIRVAAFNVLNYDNGAEK GFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIANNGYDEKSAIAYLTKSLGPDWKYITPPNMNRLGSDVIAVGI LYNAKRVKPVNAAVVFDDQSQKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTRVKAVE QLIQWAAKNPTRVQQPNILFLGDMNSYAKEDPILAFEKANYKVLLNDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAI ADSNLYRFVKRAFVWHINADEPTALDYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDLKESAQQGGVLNFIQQLLDWI AQLFTRT
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89165; Mature: 89165
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSKLNLLSLSLLCVGALSTSSSIYAQLMFSQYIDGSSNRKGLEIYNPDNSSVNLSDYE CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCEE VQQFNNGGTAKSLTVSLQGNLASKQKFVIGRSELQAELGAKVNQVAGLSFNGDDAIVLLY EEECCCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCHHHEECCEECCCCEEEEEE RGVAVDRFGRIGERPEKGWGNAVSSIGNSFKRIQTENSALSIDATAAFDLDQSWAAWSNR ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCCC NDFSNIQTTATPPATEAVSCSSQDTPIADLQSAAQNQYYTVRGIITADYRYSNGFSGFYI CCCCCCEECCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEEEEEEEEEEEECCCCCEEEE QTPDSQAKAGLSNAIFVYIPASSQIKGGEVGQEVILRGRLTTYQNQKQIDQLSQDIKTCN ECCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TAAQNQIQPQIIQLPFTALTGNEGHVPQRYQGMLVKFAQNLTVSENYNYGRFGELSLSLG HHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEEC RLYIPTNLYPANSSDAKALAQKNLLSRIILDDGYNNQNRTPWLPQNFSAAHTLRSGYQLK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEC NVEGILEYRFNSWRIQPIPNQHNIQIVEDTNPRQTIAAKNGQNIRVAAFNVLNYDNGAEK CCHHHEEECCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCC GFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIANNGYDEKSAIAYLTKSLGPDW CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCC KYITPPNMNRLGSDVIAVGILYNAKRVKPVNAAVVFDDQSQKNRVTMAQTFQPIHGGKFF EEECCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEHHHHCCCCCCCEEE TVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTRVKAVEQLIQWAAKNPTRVQQPNILF EECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE LGDMNSYAKEDPILAFEKANYKVLLNDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAI EECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHH ADSNLYRFVKRAFVWHINADEPTALDYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDL CCHHHHHHHHHHEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCEEEEECC KESAQQGGVLNFIQQLLDWIAQLFTRT HHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVSKLNLLSLSLLCVGALSTSSSIYAQLMFSQYIDGSSNRKGLEIYNPDNSSVNLSDYE CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCEE VQQFNNGGTAKSLTVSLQGNLASKQKFVIGRSELQAELGAKVNQVAGLSFNGDDAIVLLY EEECCCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCHHHEECCEECCCCEEEEEE RGVAVDRFGRIGERPEKGWGNAVSSIGNSFKRIQTENSALSIDATAAFDLDQSWAAWSNR ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCCC NDFSNIQTTATPPATEAVSCSSQDTPIADLQSAAQNQYYTVRGIITADYRYSNGFSGFYI CCCCCCEECCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEEEEEEEEEEEECCCCCEEEE QTPDSQAKAGLSNAIFVYIPASSQIKGGEVGQEVILRGRLTTYQNQKQIDQLSQDIKTCN ECCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TAAQNQIQPQIIQLPFTALTGNEGHVPQRYQGMLVKFAQNLTVSENYNYGRFGELSLSLG HHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEEC RLYIPTNLYPANSSDAKALAQKNLLSRIILDDGYNNQNRTPWLPQNFSAAHTLRSGYQLK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEC NVEGILEYRFNSWRIQPIPNQHNIQIVEDTNPRQTIAAKNGQNIRVAAFNVLNYDNGAEK CCHHHEEECCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCC GFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIANNGYDEKSAIAYLTKSLGPDW CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCC KYITPPNMNRLGSDVIAVGILYNAKRVKPVNAAVVFDDQSQKNRVTMAQTFQPIHGGKFF EEECCCCCHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEHHHHCCCCCCCEEE TVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTRVKAVEQLIQWAAKNPTRVQQPNILF EECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE LGDMNSYAKEDPILAFEKANYKVLLNDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAI EECCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHH ADSNLYRFVKRAFVWHINADEPTALDYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDL CCHHHHHHHHHHEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCEEEEECC KESAQQGGVLNFIQQLLDWIAQLFTRT HHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA