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The map label for this gene is yajC [H]

Identifier: 50083825

GI number: 50083825

Start: 578854

End: 579183

Strand: Reverse

Name: yajC [H]

Synonym: ACIAD0589

Alternate gene names: 50083825

Gene position: 579183-578854 (Counterclockwise)

Preceding gene: 161349969

Following gene: 50083824

Centisome position: 16.09

GC content: 44.55

Gene sequence:

>330_bases
ATGAGCTTTTTAATTTCTACTGCTCACGCTGCAGATGCGGCGCCGCAAGGTCCAGGCATGATGGCTAACATATTGATGAT
TGTTGTATTTGTTGCAATCTTCTATTTCTTGATCTGGCGTCCTCAATCGAAACGTGCCAAAGAACATCGTACTTTGGTTG
AGAGCCTAGGTGTAGGCAGCGAAGTTGTTTTTGCTGGTGGCTTAATGGGCCGTATCACCAAAATCGAAGGCGATTATGCT
GTGGTTGAATTGAGCCGTGGCGTAGAAGTTAAAATTCAACGCGCTAGTGTGATTTCAGTGTTACCTGAAGGCACACTCAA
TAACCTTTAA

Upstream 100 bases:

>100_bases
CATCAGAATTTGCGCTCAACAAAAAGACAAGGTAAATTGCAGAGCGAACTGGTATTTTTGTCATGATTTGACGCCCATTT
TTTAACTTTAGGAAACCAAA

Downstream 100 bases:

>100_bases
TCAAAAAGACAGTCGTGCACCCCGCACGACTTTTTCATTTTAAGAAGAAAGCGAATGCGTTACCCTGCATGGAAATATGT
GCTGATCATTGTTGTCTTGA

Product: IISP family preprotein translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIEGDYA
VVELSRGVEVKIQRASVISVLPEGTLNNL

Sequences:

>Translated_109_residues
MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIEGDYA
VVELSRGVEVKIQRASVISVLPEGTLNNL
>Mature_108_residues
SFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIEGDYAV
VELSRGVEVKIQRASVISVLPEGTLNNL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=50.9090909090909, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11788; Mature: 11657

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
EVVFAGGLMGRITKIEGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL
CEEECCCHHHHEEECCCCEEEEEECCCCEEEEECHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
EVVFAGGLMGRITKIEGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL
CEEECCCHHHHEEECCCCEEEEEECCCCEEEEECHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]