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The map label for this gene is yoaB [C]

Identifier: 50083406

GI number: 50083406

Start: 118060

End: 118419

Strand: Direct

Name: yoaB [C]

Synonym: ACIAD0117

Alternate gene names: 50083406

Gene position: 118060-118419 (Clockwise)

Preceding gene: 50083405

Following gene: 50083407

Centisome position: 3.28

GC content: 46.67

Gene sequence:

>360_bases
ATGTCTCAGTCTGATATTCAACGCATTAATACCACACAGGTCATGAGTTCAGTCACCATTTTTAATCAGGTGGCTTATCT
ATCAGGTCAGGTACCACAAGATACAGCACTCGATATTGAGGGACAAACCCGAGATGTCCTGAGCACCATCGATCAATTGC
TGGCAGCAGCCAACTCAGATAAATCCCGACTTCTATCTGTGCAATTGTTTCTCAAAAATCTTTCAGATTTTCCCAAGGTC
AATGCGATCTGGATGGAGTGGCTAGATGGTCTGGCAACGCCAGCACGTGCCACGATTCAAGCCGACCTGGTCAATCCAGA
CTGGTTGATTGAGATTGCGGTAATCGCGGCACAGAAGTAG

Upstream 100 bases:

>100_bases
TTGATGATGTCGCGGCAGCATCTGGCACCGTCGGTTATGAACTGATGTGTGCTGTGACCGCACGTGTTCCTTTTACAATT
CAAACATAAGGATAATGAGC

Downstream 100 bases:

>100_bases
TGCCCTTCAAAACGGGGAGATCATAAGATGTCCGCGTTTTGAAAATTCAAGATAGAAATTGAAGCCAAAAGATTCAGTCA
TAGTTTCTATGTTGTTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSQSDIQRINTTQVMSSVTIFNQVAYLSGQVPQDTALDIEGQTRDVLSTIDQLLAAANSDKSRLLSVQLFLKNLSDFPKV
NAIWMEWLDGLATPARATIQADLVNPDWLIEIAVIAAQK

Sequences:

>Translated_119_residues
MSQSDIQRINTTQVMSSVTIFNQVAYLSGQVPQDTALDIEGQTRDVLSTIDQLLAAANSDKSRLLSVQLFLKNLSDFPKV
NAIWMEWLDGLATPARATIQADLVNPDWLIEIAVIAAQK
>Mature_118_residues
SQSDIQRINTTQVMSSVTIFNQVAYLSGQVPQDTALDIEGQTRDVLSTIDQLLAAANSDKSRLLSVQLFLKNLSDFPKVN
AIWMEWLDGLATPARATIQADLVNPDWLIEIAVIAAQK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=112, Percent_Identity=36.6071428571429, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13116; Mature: 12985

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSDIQRINTTQVMSSVTIFNQVAYLSGQVPQDTALDIEGQTRDVLSTIDQLLAAANSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC
KSRLLSVQLFLKNLSDFPKVNAIWMEWLDGLATPARATIQADLVNPDWLIEIAVIAAQK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEEEEEECCC
>Mature Secondary Structure 
SQSDIQRINTTQVMSSVTIFNQVAYLSGQVPQDTALDIEGQTRDVLSTIDQLLAAANSD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC
KSRLLSVQLFLKNLSDFPKVNAIWMEWLDGLATPARATIQADLVNPDWLIEIAVIAAQK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA