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The map label for this gene is 50083393

Identifier: 50083393

GI number: 50083393

Start: 101027

End: 102733

Strand: Direct

Name: 50083393

Synonym: ACIAD0103

Alternate gene names: NA

Gene position: 101027-102733 (Clockwise)

Preceding gene: 50083392

Following gene: 50083396

Centisome position: 2.81

GC content: 44.11

Gene sequence:

>1707_bases
GTGGCTGGTTCCCCGCGTGTGTATAATAGCCAGCATTGTGGATTTTCAGTGGCCGTTATGCGCTTTCTTTTGTTACTTCT
GACCGCAGTTTTGATCAGTCTGGCTTGGTTGTCGCCAGACCATAGCTATCCATGGTTGACCTTTGCCAGTGAAATGCTGA
GCTTTGCAGCATTTTTGAGTTTGCTGGCGTTATTCCTGAATCGTCCCTTAGAATTGCCGCGTGTGCAATTGCTGGCATTG
CCTGTGGTGTTTATTCCCATGATTCAATGGGGCTTTGGACTGGTGGTCGATTTTAGTTCAGCACTGTTGTCGAGTGCCTA
TCTGCTGGGCTTTTGGTTGACCATGCTGCTTGGCTATAATTTAAGCCGTTCTTCTGCGGATCGTGAGCGGATGTTTACCC
TCAGCAGTTATTTATTATTTGCCGTTGCACTGCTCACCAGTCTGATTGCGTGTATTCAGTGGCTTAATCTGGAATCTCAT
GTACCTGGGGTGATGAATCTTTATAGTCATCGTCCTTATGCCAATTTTGCTCAGCCCAACAATATGTCAACTTTCCTGAT
TTTAGGGTTGCTGGGCTGTTTGTATCTGGCCGAAAAGCAAAAATTAAAACAATACTATATTTGGCCTGTTGCGGCGTTGA
TTGTTTTTGCGATTACTTTAAGTCAGTCGCGTACCGCATGGGTATTTGGACTGTTCTTTATCATTTACTGGACCTATAAA
TCCTGGCGTTATCCAACCCATTTAAAGCGCTATGCGGTATTGCTCTGGGCAATTGGTTTTTTTGCTGTTGGTCTGCTCTT
TCCCCGATTTACCCGTTTAATCCAGAAACTTAAGGAAGGTAATGTTGTACAGACCTCAAGTGTCGTAGAGCGTGCAAGTG
CTGGACATGAACGTTTGGGAATCTGGCAGCAGATGCTGGATGCAATCCATCAAAAACCGTGGACAGGCTATGGCTGGAAC
CAGACCAGTATTGCAGAATTGTCCAGTATGTCTTCCAATACCATTCATGTCTGGTTTACCAGTGCACACAATGTGGTTCT
GGATTTACTGGTATGGAATGGATGGTTGCTGGGTGGGTTGATTACGATTTGTATATTGATCTGGATATGTTGGTTGAACG
TTCATGCCAAAACGACAGAATCGATCATCGCTTGCCTGATGGTCTCTGCGGTATGGATTCACACGCTTTTGGAATATCCA
TTACAGTACGCCTACTTTTTATTGCCTGTCGGGTTTTTAATGGGTTTGATTCAGGCGCAAACGCCAGATCAGACAGCCCG
ATCTGTTCCAGTCTCTGTCATACGTAGTATTTGGGTAATTGGAATTATGTTACTCGCTTTAATCTGGCGAGATTATAATC
TTTACAAGGTCAATAGCTTACGTATTTTAAAAAATCAGCCAGCAAATATCGAGATCTGGGGCAGTTCAAAGATTCTGGTA
CTCACCGAGTTCGATCAGCGCTTATACTGGTTAAAGTTAAGCCCAGTTGCACCACTGACCAGCACAGAGCTGGATCAGAT
TGAGAAGATGGTACAAAACAAAGCTACGCCTTACAATTTGCAAAAATATGCGCAGCTTTTGCTGGCCAATCATCAATTTG
AAAAAGCCCAGCAGCAGATCGCGTATCTAAACAGGTTGCACAAAAAAGATTACACGTTACAAGATTTGCAACAGGCCAAT
GCTTCTGCTGTAGAGTCATCCAAGTAA

Upstream 100 bases:

>100_bases
TGAAGACATGCTGAAAGATAGCTGGAACTGGCAAAAACAGAATCCACAAGGGTATTCGAACTAATTATTTATCGATTTAA
CGGGAAACAGTCAGAAAGGT

Downstream 100 bases:

>100_bases
AAGCGAATTGATAAAAAAGGCGATTCATGATGAATCGCCTTTTTACATCGATTTTTAATTAAGCCTGAATCAGGGCTGTC
ACTTCATCGACATAATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipid A Core; O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MAGSPRVYNSQHCGFSVAVMRFLLLLLTAVLISLAWLSPDHSYPWLTFASEMLSFAAFLSLLALFLNRPLELPRVQLLAL
PVVFIPMIQWGFGLVVDFSSALLSSAYLLGFWLTMLLGYNLSRSSADRERMFTLSSYLLFAVALLTSLIACIQWLNLESH
VPGVMNLYSHRPYANFAQPNNMSTFLILGLLGCLYLAEKQKLKQYYIWPVAALIVFAITLSQSRTAWVFGLFFIIYWTYK
SWRYPTHLKRYAVLLWAIGFFAVGLLFPRFTRLIQKLKEGNVVQTSSVVERASAGHERLGIWQQMLDAIHQKPWTGYGWN
QTSIAELSSMSSNTIHVWFTSAHNVVLDLLVWNGWLLGGLITICILIWICWLNVHAKTTESIIACLMVSAVWIHTLLEYP
LQYAYFLLPVGFLMGLIQAQTPDQTARSVPVSVIRSIWVIGIMLLALIWRDYNLYKVNSLRILKNQPANIEIWGSSKILV
LTEFDQRLYWLKLSPVAPLTSTELDQIEKMVQNKATPYNLQKYAQLLLANHQFEKAQQQIAYLNRLHKKDYTLQDLQQAN
ASAVESSK

Sequences:

>Translated_568_residues
MAGSPRVYNSQHCGFSVAVMRFLLLLLTAVLISLAWLSPDHSYPWLTFASEMLSFAAFLSLLALFLNRPLELPRVQLLAL
PVVFIPMIQWGFGLVVDFSSALLSSAYLLGFWLTMLLGYNLSRSSADRERMFTLSSYLLFAVALLTSLIACIQWLNLESH
VPGVMNLYSHRPYANFAQPNNMSTFLILGLLGCLYLAEKQKLKQYYIWPVAALIVFAITLSQSRTAWVFGLFFIIYWTYK
SWRYPTHLKRYAVLLWAIGFFAVGLLFPRFTRLIQKLKEGNVVQTSSVVERASAGHERLGIWQQMLDAIHQKPWTGYGWN
QTSIAELSSMSSNTIHVWFTSAHNVVLDLLVWNGWLLGGLITICILIWICWLNVHAKTTESIIACLMVSAVWIHTLLEYP
LQYAYFLLPVGFLMGLIQAQTPDQTARSVPVSVIRSIWVIGIMLLALIWRDYNLYKVNSLRILKNQPANIEIWGSSKILV
LTEFDQRLYWLKLSPVAPLTSTELDQIEKMVQNKATPYNLQKYAQLLLANHQFEKAQQQIAYLNRLHKKDYTLQDLQQAN
ASAVESSK
>Mature_567_residues
AGSPRVYNSQHCGFSVAVMRFLLLLLTAVLISLAWLSPDHSYPWLTFASEMLSFAAFLSLLALFLNRPLELPRVQLLALP
VVFIPMIQWGFGLVVDFSSALLSSAYLLGFWLTMLLGYNLSRSSADRERMFTLSSYLLFAVALLTSLIACIQWLNLESHV
PGVMNLYSHRPYANFAQPNNMSTFLILGLLGCLYLAEKQKLKQYYIWPVAALIVFAITLSQSRTAWVFGLFFIIYWTYKS
WRYPTHLKRYAVLLWAIGFFAVGLLFPRFTRLIQKLKEGNVVQTSSVVERASAGHERLGIWQQMLDAIHQKPWTGYGWNQ
TSIAELSSMSSNTIHVWFTSAHNVVLDLLVWNGWLLGGLITICILIWICWLNVHAKTTESIIACLMVSAVWIHTLLEYPL
QYAYFLLPVGFLMGLIQAQTPDQTARSVPVSVIRSIWVIGIMLLALIWRDYNLYKVNSLRILKNQPANIEIWGSSKILVL
TEFDQRLYWLKLSPVAPLTSTELDQIEKMVQNKATPYNLQKYAQLLLANHQFEKAQQQIAYLNRLHKKDYTLQDLQQANA
SAVESSK

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64867; Mature: 64736

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
AGSPRVYNSQHCGFSVAVMRFLLLLLTAVLISLAWLSPDHSYPWLTFASEMLSFAAFLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LLALFLNRPLELPRVQLLALPVVFIPMIQWGFGLVVDFSSALLSSAYLLGFWLTMLLGYN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSRSSADRERMFTLSSYLLFAVALLTSLIACIQWLNLESHVPGVMNLYSHRPYANFAQPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCC
NMSTFLILGLLGCLYLAEKQKLKQYYIWPVAALIVFAITLSQSRTAWVFGLFFIIYWTYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SWRYPTHLKRYAVLLWAIGFFAVGLLFPRFTRLIQKLKEGNVVQTSSVVERASAGHERLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHH
IWQQMLDAIHQKPWTGYGWNQTSIAELSSMSSNTIHVWFTSAHNVVLDLLVWNGWLLGGL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
ITICILIWICWLNVHAKTTESIIACLMVSAVWIHTLLEYPLQYAYFLLPVGFLMGLIQAQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPDQTARSVPVSVIRSIWVIGIMLLALIWRDYNLYKVNSLRILKNQPANIEIWGSSKILV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCEEEECCCEEEE
LTEFDQRLYWLKLSPVAPLTSTELDQIEKMVQNKATPYNLQKYAQLLLANHQFEKAQQQI
EEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYLNRLHKKDYTLQDLQQANASAVESSK
HHHHHHHHCCCCHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA