| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is sfsA
Identifier: 49475601
GI number: 49475601
Start: 941345
End: 942052
Strand: Reverse
Name: sfsA
Synonym: BH08360
Alternate gene names: 49475601
Gene position: 942052-941345 (Counterclockwise)
Preceding gene: 49475606
Following gene: 49475600
Centisome position: 48.78
GC content: 33.9
Gene sequence:
>708_bases ATGTTCTTTATTCATAAACTTTTTCCCGCAAAGCTTATTCGTCGTTATAAACGTTTTCTTGCTGATGTTAAACGTGAAGA TCAACACATCTTCACCGTATCGGTTCCCAATACAGGATCGATGCTTGGATTAACAACTCCAAATTCTAATATTTGGCTTT CATATCACAATAATCCCAAACGAAGATACGCATATCAATTAGAGATTGTCGAAGCAAATAATACCTTAGTTGGAATCAAT ACAACTTTACCCAACAAACTTGCATTAGAAGCAATTCAAAATAATTTACTACCAGAATTAAACGGATACAAAACAATCTT GAAAGAACAACGTTATGGTATTCAATCACGAATTGACTTTCTTTTACGTGATGACATCCTACCTGACTGTTATCTAGAAA TTAAAAATGTTCATTTTATTCGCCAAAAAGGACTAGCAGAATTTCCTGATACTGAGACAAAACGTGGCACACGTCATCTT GAAGAGCTTATAAAAATCGTGCAACAAGGAAAACGAGCTGTTATGCTTTATATAATTCAACGGGAAGATTGTTCAGCTTT TACAATCTGCCGTGATCTTGATCCAACCTATGGACGTAAATTTGATTTAGCATTAGAATCAGGGGTAGAATTTTATGCTA TAAAATGTCAAGTAAGTGTAGAAGGTATTTTCCCAATTCAGCAAGTGAAAATAGAAAACAGAAAATGA
Upstream 100 bases:
>100_bases CAACACTTTTGCACCAATATTGCTTTATTTAAACATGTTATAATAGTTACACTGATTATTTGAGTTGAATTATAAAATTA TGCCTTTTAAGTTAAGGAAT
Downstream 100 bases:
>100_bases CTGATTATATTGAATATTATAAAATACCCTTGAAATTTAACGGACAAATCCGCATTTTTGATGATTACGCTTTTGATAAA ATGCGGAAAGTTGGTCGTAT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MFFIHKLFPAKLIRRYKRFLADVKREDQHIFTVSVPNTGSMLGLTTPNSNIWLSYHNNPKRRYAYQLEIVEANNTLVGIN TTLPNKLALEAIQNNLLPELNGYKTILKEQRYGIQSRIDFLLRDDILPDCYLEIKNVHFIRQKGLAEFPDTETKRGTRHL EELIKIVQQGKRAVMLYIIQREDCSAFTICRDLDPTYGRKFDLALESGVEFYAIKCQVSVEGIFPIQQVKIENRK
Sequences:
>Translated_235_residues MFFIHKLFPAKLIRRYKRFLADVKREDQHIFTVSVPNTGSMLGLTTPNSNIWLSYHNNPKRRYAYQLEIVEANNTLVGIN TTLPNKLALEAIQNNLLPELNGYKTILKEQRYGIQSRIDFLLRDDILPDCYLEIKNVHFIRQKGLAEFPDTETKRGTRHL EELIKIVQQGKRAVMLYIIQREDCSAFTICRDLDPTYGRKFDLALESGVEFYAIKCQVSVEGIFPIQQVKIENRK >Mature_235_residues MFFIHKLFPAKLIRRYKRFLADVKREDQHIFTVSVPNTGSMLGLTTPNSNIWLSYHNNPKRRYAYQLEIVEANNTLVGIN TTLPNKLALEAIQNNLLPELNGYKTILKEQRYGIQSRIDFLLRDDILPDCYLEIKNVHFIRQKGLAEFPDTETKRGTRHL EELIKIVQQGKRAVMLYIIQREDCSAFTICRDLDPTYGRKFDLALESGVEFYAIKCQVSVEGIFPIQQVKIENRK
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=225, Percent_Identity=39.1111111111111, Blast_Score=173, Evalue=9e-45,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_BARHE (Q6G3D7)
Other databases:
- EMBL: BX897699 - RefSeq: YP_033642.1 - GeneID: 2865184 - GenomeReviews: BX897699_GR - KEGG: bhe:BH08360 - NMPDR: fig|283166.1.peg.770 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: Q6G3D7 - ProtClustDB: PRK00347 - BioCyc: BHEN283166:BH08360-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 27408; Mature: 27408
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFIHKLFPAKLIRRYKRFLADVKREDQHIFTVSVPNTGSMLGLTTPNSNIWLSYHNNPK CEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCC RRYAYQLEIVEANNTLVGINTTLPNKLALEAIQNNLLPELNGYKTILKEQRYGIQSRIDF CEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH LLRDDILPDCYLEIKNVHFIRQKGLAEFPDTETKRGTRHLEELIKIVQQGKRAVMLYIIQ HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE REDCSAFTICRDLDPTYGRKFDLALESGVEFYAIKCQVSVEGIFPIQQVKIENRK ECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure MFFIHKLFPAKLIRRYKRFLADVKREDQHIFTVSVPNTGSMLGLTTPNSNIWLSYHNNPK CEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCC RRYAYQLEIVEANNTLVGINTTLPNKLALEAIQNNLLPELNGYKTILKEQRYGIQSRIDF CEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH LLRDDILPDCYLEIKNVHFIRQKGLAEFPDTETKRGTRHLEELIKIVQQGKRAVMLYIIQ HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE REDCSAFTICRDLDPTYGRKFDLALESGVEFYAIKCQVSVEGIFPIQQVKIENRK ECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA