| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475198
Identifier: 49475198
GI number: 49475198
Start: 457809
End: 458594
Strand: Reverse
Name: 49475198
Synonym: BH03990
Alternate gene names: NA
Gene position: 458594-457809 (Counterclockwise)
Preceding gene: 49475201
Following gene: 49475193
Centisome position: 23.75
GC content: 40.2
Gene sequence:
>786_bases ATGGCTGAAGATCTCTATAAACGTCTTAACACTGTTGATCGTCTCTTTACATTAGCTTTAGATTTACACAGCCATACAGA TCTTGCAGCACAAACCCTTATGAAATCTGGAAAAGTTCATTCCATAGAACGTGTTGAAACCGACATGCTTTATCAAAACC ATGACAAAAAATTTCATTTACGTTCTCGAGAATTTCTTGATTTTCCTCAAAATTATTGTGATCTTATCGTTTCACTTCTT TCATTACAATTGACCAATGATACCCCTGGCGTTCTTAGTCAGATAAAAAATATCCTTAAACCAGATGGTTTATTTCTGGC TGTTATGGCTGGGGTTGGTACGCTCTCAGAATTACGTGAATGCCTCTTGCAAGCTGAAATTGAAATCTATGGCGGGGCAA GTCCAAGGATCTATCCTTTTGCCGATATTCGTGCGGTAGGTGCTCTTTTACAGCGTGTTGGTTTTGCTCTCCCTGTAGCA GATATTGAAGATGTCACAATACGCTACGATACAATGTTTGATCTCATAAATGACCTTAGAGCTATGGGAATGCAAAATGC GCTCATTAATCGCTCACGACGCCCTGTATCCAAGCGCTTTTTTCTCCGTGCAGCTGAAATCTATGCAAAACGATTTAGCG ATCTTGATGGCCGTATTCGCGCGCATTTTTCTTTCATTTGGCTTTCTGGTTGGGCTCCTCACCCAAATCAGCAAAAACCC ATACAGCCAGGCTCAGCGCAAATATCTCTTGCAGATGTTTTAGTAAAACAGTCAAAAAAAACATAA
Upstream 100 bases:
>100_bases TATGTCGCATCCTTTAATTTTTGATCACGAACGCATTGAACAATTCCGCAAACGCGCTTTTCAAAAAGCAAAAGAAGGGT ATGACTTTCTACTATCCCAC
Downstream 100 bases:
>100_bases GATTCACCATGAAAATTATTTTTCAAAGATGCTTCTATCCGTTGTTTGTAACATCTGGCTGGTTATAGTTCCAGCCAACA TTGAATCATTTACATTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MAEDLYKRLNTVDRLFTLALDLHSHTDLAAQTLMKSGKVHSIERVETDMLYQNHDKKFHLRSREFLDFPQNYCDLIVSLL SLQLTNDTPGVLSQIKNILKPDGLFLAVMAGVGTLSELRECLLQAEIEIYGGASPRIYPFADIRAVGALLQRVGFALPVA DIEDVTIRYDTMFDLINDLRAMGMQNALINRSRRPVSKRFFLRAAEIYAKRFSDLDGRIRAHFSFIWLSGWAPHPNQQKP IQPGSAQISLADVLVKQSKKT
Sequences:
>Translated_261_residues MAEDLYKRLNTVDRLFTLALDLHSHTDLAAQTLMKSGKVHSIERVETDMLYQNHDKKFHLRSREFLDFPQNYCDLIVSLL SLQLTNDTPGVLSQIKNILKPDGLFLAVMAGVGTLSELRECLLQAEIEIYGGASPRIYPFADIRAVGALLQRVGFALPVA DIEDVTIRYDTMFDLINDLRAMGMQNALINRSRRPVSKRFFLRAAEIYAKRFSDLDGRIRAHFSFIWLSGWAPHPNQQKP IQPGSAQISLADVLVKQSKKT >Mature_260_residues AEDLYKRLNTVDRLFTLALDLHSHTDLAAQTLMKSGKVHSIERVETDMLYQNHDKKFHLRSREFLDFPQNYCDLIVSLLS LQLTNDTPGVLSQIKNILKPDGLFLAVMAGVGTLSELRECLLQAEIEIYGGASPRIYPFADIRAVGALLQRVGFALPVAD IEDVTIRYDTMFDLINDLRAMGMQNALINRSRRPVSKRFFLRAAEIYAKRFSDLDGRIRAHFSFIWLSGWAPHPNQQKPI QPGSAQISLADVLVKQSKKT
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40018642, Length=252, Percent_Identity=37.3015873015873, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI86792933, Length=247, Percent_Identity=33.6032388663968, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17535003, Length=193, Percent_Identity=36.2694300518135, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI19922210, Length=195, Percent_Identity=42.5641025641026, Blast_Score=159, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29574; Mature: 29442
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDLYKRLNTVDRLFTLALDLHSHTDLAAQTLMKSGKVHSIERVETDMLYQNHDKKFHL CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE RSREFLDFPQNYCDLIVSLLSLQLTNDTPGVLSQIKNILKPDGLFLAVMAGVGTLSELRE CCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH CLLQAEIEIYGGASPRIYPFADIRAVGALLQRVGFALPVADIEDVTIRYDTMFDLINDLR HHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH AMGMQNALINRSRRPVSKRFFLRAAEIYAKRFSDLDGRIRAHFSFIWLSGWAPHPNQQKP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCC IQPGSAQISLADVLVKQSKKT CCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AEDLYKRLNTVDRLFTLALDLHSHTDLAAQTLMKSGKVHSIERVETDMLYQNHDKKFHL CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE RSREFLDFPQNYCDLIVSLLSLQLTNDTPGVLSQIKNILKPDGLFLAVMAGVGTLSELRE CCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH CLLQAEIEIYGGASPRIYPFADIRAVGALLQRVGFALPVADIEDVTIRYDTMFDLINDLR HHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH AMGMQNALINRSRRPVSKRFFLRAAEIYAKRFSDLDGRIRAHFSFIWLSGWAPHPNQQKP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCC IQPGSAQISLADVLVKQSKKT CCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]