Definition Bartonella henselae str. Houston-1, complete genome.
Accession NC_005956
Length 1,931,047

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The map label for this gene is 49475106

Identifier: 49475106

GI number: 49475106

Start: 378223

End: 378771

Strand: Reverse

Name: 49475106

Synonym: BH03020

Alternate gene names: NA

Gene position: 378771-378223 (Counterclockwise)

Preceding gene: 49475107

Following gene: 49475105

Centisome position: 19.61

GC content: 36.98

Gene sequence:

>549_bases
ATGAACACTCTTATTCCGATATCGGAACAAACTGTTGGACAGGAAACTGTTCAAACTGTTAACGCACGTGATTTGCATGT
ATTTTTGGGAATTACATCAAAGTTTGCAGACTGGATTAAAAATCGCATTAAAGAATGTAATTTTCGAGAAAATATAGACT
TTATAGGTTTTTCTAAAAATTTAGAAAAAGGTGGGCGTCCAAGCATAGAATACCACATTACCTTAGACATGGCTAAACAC
CTTTCTATGATAGAGAGGAATGAGAAAGGACATGAAGCTCGTCAATATTTTAATTTTTTATTTGACAACATGTCAATATT
ATGTCTATTGTCGAATCAGGTGCCTAAGAAACACCTTAAATGCATAGCGGATGGATTGCCGAAACAGTTTATTTTCCGCA
CATTAAAGGCTTTGACTCATTATATGCGTGTGGCATATAGTGGTTTTGTCGGGTGTAGTTACGCTATACAATACCCTTAT
GGGAAAAGCGTGACGACGGACTATGCACCGTGTTTCTTAGCACCCGGCACTCTTTTTGAGTGTCATTAA

Upstream 100 bases:

>100_bases
TTGGGGGAAAGCATAACGACGGACTTATCGCCGTGTTTTTGAGCACCCGGCACTCTTTTATCGAGTGTCAATCAAAAACA
TTTAACGATAAGGAGTTCTC

Downstream 100 bases:

>100_bases
GAAACGTCTAACTGCATAGGAGTTCACATGAACACTCTTATAGAAATATCAGAACAGGTTATTGATCAAGAAACTGTTCA
AACGGTCAATGCGCGTGATT

Product: anti-repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH
LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY
GKSVTTDYAPCFLAPGTLFECH

Sequences:

>Translated_182_residues
MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH
LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY
GKSVTTDYAPCFLAPGTLFECH
>Mature_182_residues
MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKNLEKGGRPSIEYHITLDMAKH
LSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLKCIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPY
GKSVTTDYAPCFLAPGTLFECH

Specific function: Unknown

COG id: COG3561

COG function: function code K; Phage anti-repressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013557
- InterPro:   IPR018876 [H]

Pfam domain/function: PF08346 AntA; PF10548 P22_AR_C [H]

EC number: NA

Molecular weight: Translated: 20897; Mature: 20897

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKN
CCCCCCCCHHHCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCCC
LEKGGRPSIEYHITLDMAKHLSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLK
CCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
CIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPYGKSVTTDYAPCFLAPGTLFE
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEE
CH
CC
>Mature Secondary Structure
MNTLIPISEQTVGQETVQTVNARDLHVFLGITSKFADWIKNRIKECNFRENIDFIGFSKN
CCCCCCCCHHHCCHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCCC
LEKGGRPSIEYHITLDMAKHLSMIERNEKGHEARQYFNFLFDNMSILCLLSNQVPKKHLK
CCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
CIADGLPKQFIFRTLKALTHYMRVAYSGFVGCSYAIQYPYGKSVTTDYAPCFLAPGTLFE
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEE
CH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]