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The map label for this gene is rimP

Identifier: 49475030

GI number: 49475030

Start: 294490

End: 295140

Strand: Reverse

Name: rimP

Synonym: BH02180

Alternate gene names: 49475030

Gene position: 295140-294490 (Counterclockwise)

Preceding gene: 49475031

Following gene: 49475029

Centisome position: 15.28

GC content: 36.71

Gene sequence:

>651_bases
ATGAAACTGACTTGGATAAAGTGTATGAGCAAAACTGAAAGAATAAGCGATATTGATGAGCCGCGTCTGTTTGAAGAAAA
CGGCGTTGAAGCACATATTGCTGCTTTTGTTATGCCATTGCTCAAACCTTTAGGTTTTCGTTTGGTTCGCGTAAAACTTC
TTGGGCTCAATGGTTTAACGCTTCAGATTATGGTAGAACGCCCTGATGGCTCTATGACCGTAGAAGATTGTGAAACTGTT
AGTCGAACTGTTTCACCCCTTCTTGATGTACAAAATGTTATTGAACGCAAGTATCATTTAGAAATTTCATCTCCTGGAAT
TGATCGTCCATTGGTAAGAAAATCTGATTTTTTTCATTGGCAAGGGCATATTGCGAAAATTGAAACCAAAATAATACTTG
AGGGGCGTCGAAAATTTCGTGGAACGCTTACAAATATTACGCAAGATGGATTTACTTTAAATACCGATAAAGCCGCTTAT
GGAGAATCCATGTATATTTCTATTCCTTTTGATGACATCATCGATGCGCATTTGGTGCTTACCGATGAACTTATTCGCGA
TGCGTTGAAAAAAAATAAAGATTTAAGCCAACAATTTATCTCAGAAGATAATCAAAAACTCTCAAAACAGGAACGAAATT
ACAAGAATTAA

Upstream 100 bases:

>100_bases
CTTGAAAAATTTTTAATTTAAGAGTATCAATGGTTAAATTCTTGGTCTTATGATGAAGAGTGGGCCGTCTGGACCCGCTC
TTTTTTATGTCATAAAACTA

Downstream 100 bases:

>100_bases
TATCACTGGGATCAATGCCCATCGTGTGGTACAAAGAAGGAGAAAATCGATGGCTACAAGCGCTAACAGGCTTGAAATTC
TGCAAATTGCAGATGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERPDGSMTVEDCETV
SRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAY
GESMYISIPFDDIIDAHLVLTDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN

Sequences:

>Translated_216_residues
MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERPDGSMTVEDCETV
SRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAY
GESMYISIPFDDIIDAHLVLTDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN
>Mature_216_residues
MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERPDGSMTVEDCETV
SRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAY
GESMYISIPFDDIIDAHLVLTDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=128, Percent_Identity=30.46875, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_BARHE (Q6G4W4)

Other databases:

- EMBL:   BX897699
- RefSeq:   YP_033071.1
- ProteinModelPortal:   Q6G4W4
- SMR:   Q6G4W4
- GeneID:   2864621
- GenomeReviews:   BX897699_GR
- KEGG:   bhe:BH02180
- NMPDR:   fig|283166.1.peg.199
- HOGENOM:   HBG668072
- OMA:   CTVQIMA
- PhylomeDB:   Q6G4W4
- ProtClustDB:   PRK00092
- BioCyc:   BHEN283166:BH02180-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 24847; Mature: 24847

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLT
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCE
LQIMVERPDGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHW
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEE
QGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAYGESMYISIPFDDIIDAHLVL
CCCEEEEEHHEEECCHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHH
TDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLT
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCE
LQIMVERPDGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHW
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEE
QGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAYGESMYISIPFDDIIDAHLVL
CCCEEEEEHHEEECCHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHH
TDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA