| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is parA [C]
Identifier: 46447648
GI number: 46447648
Start: 2392264
End: 2393016
Strand: Reverse
Name: parA [C]
Synonym: pc2014
Alternate gene names: 46447648
Gene position: 2393016-2392264 (Counterclockwise)
Preceding gene: 46447649
Following gene: 46447647
Centisome position: 99.11
GC content: 35.99
Gene sequence:
>753_bases ATGAAGACAATTGCGATTAGCAGTTTTAAAGGAGGAACGGCCAAAACATCGACAGCTTTACACATAGGGGCTGCTTTGGC AAAGTTTCATAAGAAAAAAGTATTACTTATTGACTTTGATGCTCAAGCTAATTTATCGACAGGCTTAGGATTTGATCCTG ATGAAAATGATAGTTTAGCTCCAGTTTTACTAGGTAATAAAACAATTTCAGAAGTCATTAGAAAAACTCTTTTCCCAAAT TTAGACTTAATTCCTGCTGACACATGGCTAGAAAGAGTTGAAGTAACAGGGCAACTAGCTTCTGATCGTTATTCTCACGA AAAATTGCGAGACCTTATTGCTCCTCTTAAATATGATTACATTATTATTGATACTCCACCTTCACTTTGCTGGTTGACCG AATCTGCTCTCATTGCTGCTCAACACACACTCGTTTGCATTACACCAGAGTTTTATAGTGTCAAAGGCCTTGAACGATTA AGTCAATTTATGGACAGTATTAGTCAACGCCATCCTCTAAACATTTTAGGGGTAATTTTATCATTTTGGAACGCAAGAGG AAAAAGTAATCAGGCCTTTTTAGAAGTAATAGAACGCGCTTTTCCTAAAAAGATACTACAAAATAAAATTAGACGAGATA TCTCTGTTTCAGAAGCATCTATTTTTGGTAAACCTGTTTTTGAAACCGACCCTGAAGGTCGAGCTGCTGAAGATTATCTA GCTGTTACGAAAGAAATTTTAAAAAGGCTTTAA
Upstream 100 bases:
>100_bases TGGTGAAATTCAAATTGATGAATTTATACAAAAGTTAGAAATTGAAAAACAACAACGTCAATCCCATTCTCCTTACGCTT CAGCAGAAAGGAATTAAAAA
Downstream 100 bases:
>100_bases ATTATTTTCTCATGTAAATCGGCTTTACATAAGAATTTTTATCATTTAATCATAAGGTTGTCATAATGGCCAATGTCAAT TCCATTCTCTCTGAACGAGC
Product: putative partition protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKTIAISSFKGGTAKTSTALHIGAALAKFHKKKVLLIDFDAQANLSTGLGFDPDENDSLAPVLLGNKTISEVIRKTLFPN LDLIPADTWLERVEVTGQLASDRYSHEKLRDLIAPLKYDYIIIDTPPSLCWLTESALIAAQHTLVCITPEFYSVKGLERL SQFMDSISQRHPLNILGVILSFWNARGKSNQAFLEVIERAFPKKILQNKIRRDISVSEASIFGKPVFETDPEGRAAEDYL AVTKEILKRL
Sequences:
>Translated_250_residues MKTIAISSFKGGTAKTSTALHIGAALAKFHKKKVLLIDFDAQANLSTGLGFDPDENDSLAPVLLGNKTISEVIRKTLFPN LDLIPADTWLERVEVTGQLASDRYSHEKLRDLIAPLKYDYIIIDTPPSLCWLTESALIAAQHTLVCITPEFYSVKGLERL SQFMDSISQRHPLNILGVILSFWNARGKSNQAFLEVIERAFPKKILQNKIRRDISVSEASIFGKPVFETDPEGRAAEDYL AVTKEILKRL >Mature_250_residues MKTIAISSFKGGTAKTSTALHIGAALAKFHKKKVLLIDFDAQANLSTGLGFDPDENDSLAPVLLGNKTISEVIRKTLFPN LDLIPADTWLERVEVTGQLASDRYSHEKLRDLIAPLKYDYIIIDTPPSLCWLTESALIAAQHTLVCITPEFYSVKGLERL SQFMDSISQRHPLNILGVILSFWNARGKSNQAFLEVIERAFPKKILQNKIRRDISVSEASIFGKPVFETDPEGRAAEDYL AVTKEILKRL
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27868; Mature: 27868
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIAISSFKGGTAKTSTALHIGAALAKFHKKKVLLIDFDAQANLSTGLGFDPDENDSLA CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCC PVLLGNKTISEVIRKTLFPNLDLIPADTWLERVEVTGQLASDRYSHEKLRDLIAPLKYDY EEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IIIDTPPSLCWLTESALIAAQHTLVCITPEFYSVKGLERLSQFMDSISQRHPLNILGVIL EEEECCCCEEHHHHHHHHEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SFWNARGKSNQAFLEVIERAFPKKILQNKIRRDISVSEASIFGKPVFETDPEGRAAEDYL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHH AVTKEILKRL HHHHHHHHHC >Mature Secondary Structure MKTIAISSFKGGTAKTSTALHIGAALAKFHKKKVLLIDFDAQANLSTGLGFDPDENDSLA CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCC PVLLGNKTISEVIRKTLFPNLDLIPADTWLERVEVTGQLASDRYSHEKLRDLIAPLKYDY EEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IIIDTPPSLCWLTESALIAAQHTLVCITPEFYSVKGLERLSQFMDSISQRHPLNILGVIL EEEECCCCEEHHHHHHHHEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SFWNARGKSNQAFLEVIERAFPKKILQNKIRRDISVSEASIFGKPVFETDPEGRAAEDYL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHH AVTKEILKRL HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]