Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447647

Identifier: 46447647

GI number: 46447647

Start: 2391461

End: 2392198

Strand: Reverse

Name: 46447647

Synonym: pc2013

Alternate gene names: NA

Gene position: 2392198-2391461 (Counterclockwise)

Preceding gene: 46447648

Following gene: 46447646

Centisome position: 99.08

GC content: 35.5

Gene sequence:

>738_bases
ATGGCCAATGTCAATTCCATTCTCTCTGAACGAGCAAAAAAATCTTCTCATAGTTCGAAAATGGCAGAAATGGCCAAACA
ATCTGCAACAGGAAATTTAACGAGCTTTTCAGGAATCTTTAGTGTGACTGAATTAAGTGATAAAGAAAAAATAAGTTTGG
AGTTGTTATTAAAATCTTATGCCACAGAAAGCGACGATATTAATAATGATTTACAAACATTAATCTCTCTTACTTCAGAA
GTCAAAGCTATCAACAATCAAGCTGCTATTTTACATGGAGAGAGAATTAAAAAAGCGCATCAAGTACTCACCCGTTATCG
TGATGGAGCATTTACGGCTTGGTTGATAGCTGCTTACGGCAACCGTCAAACACCCTACAACCTCATGCAATATTATGAAT
TTTATGAGTCTATGCCAAAACCTCTTCGGCCTCAAATTGAATGGATGCCACGCCAAGCTGTTTATGTATTGGCAACCCGC
TCTGGAAGCTTAGAGAAAAAACAAATCATTGTAGAAAACTACAAAGGGGAAACAAAAGCCGAAGTTTTAACTTTAATTCG
ACAAACTTTTCCTTTGGACAATCAAGATAAACGTCAAAAAAAAGTTGGAAAAGGCTTCATTCAAAATCTGGACCGCCTTT
ATAATCAAATTAAGAAGAATTCTCCTAACTTTACTTCTGCTCAAAAGAAACAAATTCATCACTTACTTGAGCAGATGCAA
AATCTTATAGGTTATTAA

Upstream 100 bases:

>100_bases
TAGCTGTTACGAAAGAAATTTTAAAAAGGCTTTAAATTATTTTCTCATGTAAATCGGCTTTACATAAGAATTTTTATCAT
TTAATCATAAGGTTGTCATA

Downstream 100 bases:

>100_bases
TGTTAGATAAGAACTACACTCCTTTTATTTTAGAACCAAGTTGGCAAAAAGTTCTCAAACAAGAGCTTGAGCAACCTTAT
ATTTTTAATTTAGCAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MANVNSILSERAKKSSHSSKMAEMAKQSATGNLTSFSGIFSVTELSDKEKISLELLLKSYATESDDINNDLQTLISLTSE
VKAINNQAAILHGERIKKAHQVLTRYRDGAFTAWLIAAYGNRQTPYNLMQYYEFYESMPKPLRPQIEWMPRQAVYVLATR
SGSLEKKQIIVENYKGETKAEVLTLIRQTFPLDNQDKRQKKVGKGFIQNLDRLYNQIKKNSPNFTSAQKKQIHHLLEQMQ
NLIGY

Sequences:

>Translated_245_residues
MANVNSILSERAKKSSHSSKMAEMAKQSATGNLTSFSGIFSVTELSDKEKISLELLLKSYATESDDINNDLQTLISLTSE
VKAINNQAAILHGERIKKAHQVLTRYRDGAFTAWLIAAYGNRQTPYNLMQYYEFYESMPKPLRPQIEWMPRQAVYVLATR
SGSLEKKQIIVENYKGETKAEVLTLIRQTFPLDNQDKRQKKVGKGFIQNLDRLYNQIKKNSPNFTSAQKKQIHHLLEQMQ
NLIGY
>Mature_244_residues
ANVNSILSERAKKSSHSSKMAEMAKQSATGNLTSFSGIFSVTELSDKEKISLELLLKSYATESDDINNDLQTLISLTSEV
KAINNQAAILHGERIKKAHQVLTRYRDGAFTAWLIAAYGNRQTPYNLMQYYEFYESMPKPLRPQIEWMPRQAVYVLATRS
GSLEKKQIIVENYKGETKAEVLTLIRQTFPLDNQDKRQKKVGKGFIQNLDRLYNQIKKNSPNFTSAQKKQIHHLLEQMQN
LIGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0137 (pGP6-D) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005350 [H]

Pfam domain/function: PF03677 UPF0137 [H]

EC number: NA

Molecular weight: Translated: 28023; Mature: 27892

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVNSILSERAKKSSHSSKMAEMAKQSATGNLTSFSGIFSVTELSDKEKISLELLLKSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATESDDINNDLQTLISLTSEVKAINNQAAILHGERIKKAHQVLTRYRDGAFTAWLIAAYG
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
NRQTPYNLMQYYEFYESMPKPLRPQIEWMPRQAVYVLATRSGSLEKKQIIVENYKGETKA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHH
EVLTLIRQTFPLDNQDKRQKKVGKGFIQNLDRLYNQIKKNSPNFTSAQKKQIHHLLEQMQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NLIGY
HHHCC
>Mature Secondary Structure 
ANVNSILSERAKKSSHSSKMAEMAKQSATGNLTSFSGIFSVTELSDKEKISLELLLKSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATESDDINNDLQTLISLTSEVKAINNQAAILHGERIKKAHQVLTRYRDGAFTAWLIAAYG
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
NRQTPYNLMQYYEFYESMPKPLRPQIEWMPRQAVYVLATRSGSLEKKQIIVENYKGETKA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHH
EVLTLIRQTFPLDNQDKRQKKVGKGFIQNLDRLYNQIKKNSPNFTSAQKKQIHHLLEQMQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NLIGY
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]