Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447626

Identifier: 46447626

GI number: 46447626

Start: 2373951

End: 2375564

Strand: Direct

Name: 46447626

Synonym: pc1992

Alternate gene names: NA

Gene position: 2373951-2375564 (Clockwise)

Preceding gene: 46447625

Following gene: 46447627

Centisome position: 98.32

GC content: 37.24

Gene sequence:

>1614_bases
ATGGAAAACCCGATTTTTAAACTTGATTTAACTTATTTGGATGGTCATTTGAATATTCCTACTTTAAATTATAGTTATCT
TGTCAATACAACGCCCCCTTCTGACTATCAATCTCAAGAAATTAGCGATTCTCCTAGAGATGGAGATAACTCCTTAGTCA
ATCCTTTGGCTAATCTAGAAGAAACTGGTGCATTAATAATTCAAGCTCCTGATCTTTCATCTTTATCTGAAGAACTTCAA
CTAAGTTTTCAAGATGGAACTTCTCTAACTATTTCTCATTTTCAACTAGATTTGCTAAGGAAAAAATCGCCCTATTTTAA
GAGTTTTTGGTCAGGAAATTTTCAAGAAACCCTTCAACATCCTCTCGCTTTGACACAAAAGGAGTTTACGTCTCTGCTTA
ATTGTGTCATGGATGCTAACTTTAAAGTTCCCTTGGAAGAAATCACTTCTTCTATTCAATTAGCTGATTATTATGAGCTA
ACAGAAGTGGTAAAAAGCTTAGAAGAGCAGCTAATTGATGGATACAAATCACATAGATTTGAACTCTTTAGTTCCACTAA
AGAGAGTTTAGTCGGATTAAAAGAGCTTTTAAATTTTGCGCGTCAATGTCAATTAAACAATTTGAAAAACTATTTAGAAT
TTACCATTGTGAGCGCCTTATTAAACCAGACTTCTCAGTTAGCGGAGTTTGAAAAAATTTTAAAGCATTTCTCAAATGAG
ATAGAAGAACTCAATTTTTCAGACAATGTTTATTTGACTGATGCCTATCTTTTAGCGTTAAAAGATTGTAAAAATTTAAA
AATGCTCAATCTCAAATCTTGCAAAAATCTTACTGATGCTGGGTTAGCGCACTTGACACCCCTAACAGCCCTGCGACGTT
TGGATCTGAGTTTTTGCAGGAATCTTACCGATGCCGGATTAGCGAATTTGACACCCTTAATTGCTTTGCAACATTTAGAC
CTAAGTTGGTGTAAAAATCTTACTGATGCAGGATTAGCCCATTTGACACCCTTAGGGGCTTTACACTATCTCGATCTAAG
CATTTGCGGTAAACTCACGGATGCAGGATTAGCGCATTTAACACCCTTAGTCGATTTACAGCATTTGAATTTGCGCTATT
GTCAAAAGCTCTCGGATGCTGGATTAGCGCATTTAAGATCCTTAGTGACTTTACAACATCTTGATCTAAGCTATTGCCAA
AACCTTACTGATGCTGGATTGGCGCATTTGGCCCGCTTAACCGCTTTACAGCATCTCAGTCTGAATCGTTGTAAAAATCT
CACAGAAGCAGGATTAGTGCATTTGAGGCCTTTAGTGACTTTACAACATCTCGATCTAAGCTATTGTCAAAAACTCACTA
ACGATGGATTAGGGCTTTTTAAATCCTTAACCGCTTTACAGTATCTCAATCTGAATCATTGTCAAAAGCTCACAGATGCA
GGATTAGCGCATTTGTCCCCCTTAGGGGCTTTGCAGCATTTAGATCTGTGGTGTACTAATATCACGGATGCTGGATTAGC
CCATTTGAAACCCTTAGGGGCTTTACAATATTTAGGTCTAAGTAGATGCACTAATCTCACAGATGCAGGATTAGCGCATT
TGTCCCCCTTATAG

Upstream 100 bases:

>100_bases
AAAGGAGAAAGGGCACCAGCTAGCCAAGTTATTACAGGTAAGGGAACTGCTACAATCTTTGATGCAGAGGGTCACTTTGT
TCAAAAAATTAATTATGTGA

Downstream 100 bases:

>100_bases
GGGCTTTGCAGCATTTAGATCTGTGGTGTACTAATATCACGGATGCTGGATTAGCCCATTTGAAACCCTTAGTCACTTTA
ACGCATTTGAGACTAAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ
LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL
TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE
IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD
LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ
NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA
GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL

Sequences:

>Translated_537_residues
MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ
LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL
TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE
IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD
LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ
NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA
GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL
>Mature_537_residues
MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLEETGALIIQAPDLSSLSEELQ
LSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQHPLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYEL
TEVVKSLEEQLIDGYKSHRFELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE
IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLD
LSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQ
NLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA
GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=317, Percent_Identity=33.4384858044164, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI27734755, Length=399, Percent_Identity=30.8270676691729, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI284447308, Length=319, Percent_Identity=33.5423197492163, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI296531375, Length=395, Percent_Identity=28.6075949367089, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI6912466, Length=267, Percent_Identity=32.9588014981273, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI161333854, Length=393, Percent_Identity=23.9185750636132, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI161333852, Length=393, Percent_Identity=23.9185750636132, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI284447314, Length=323, Percent_Identity=28.7925696594427, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI289666746, Length=313, Percent_Identity=31.3099041533546, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI16306588, Length=244, Percent_Identity=30.327868852459, Blast_Score=70, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25151694, Length=369, Percent_Identity=27.3712737127371, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI25151696, Length=369, Percent_Identity=27.3712737127371, Blast_Score=86, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6322549, Length=365, Percent_Identity=27.3972602739726, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647819, Length=284, Percent_Identity=35.2112676056338, Blast_Score=136, Evalue=5e-32,
Organism=Drosophila melanogaster, GI21357913, Length=278, Percent_Identity=31.6546762589928, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24662818, Length=187, Percent_Identity=39.0374331550802, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI161076545, Length=297, Percent_Identity=29.2929292929293, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24652783, Length=297, Percent_Identity=29.2929292929293, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI161076549, Length=297, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161076547, Length=297, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24646754, Length=329, Percent_Identity=27.355623100304, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59798; Mature: 59798

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLE
CCCCEEEEEEEEECCEECCCEECEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH
ETGALIIQAPDLSSLSEELQLSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQH
HCCEEEEECCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH
PLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYELTEVVKSLEEQLIDGYKSHRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCR
HHHCCCCCCEEEHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHL
CCHHCCHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH
LNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC
GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure
MENPIFKLDLTYLDGHLNIPTLNYSYLVNTTPPSDYQSQEISDSPRDGDNSLVNPLANLE
CCCCEEEEEEEEECCEECCCEECEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH
ETGALIIQAPDLSSLSEELQLSFQDGTSLTISHFQLDLLRKKSPYFKSFWSGNFQETLQH
HCCEEEEECCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH
PLALTQKEFTSLLNCVMDANFKVPLEEITSSIQLADYYELTEVVKSLEEQLIDGYKSHRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFSSTKESLVGLKELLNFARQCQLNNLKNYLEFTIVSALLNQTSQLAEFEKILKHFSNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCR
HHHCCCCCCEEEHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHL
CCHHCCHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH
LNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDA
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC
GLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA