Click here to switch to the map view.

The map label for this gene is 46447622

Identifier: 46447622

GI number: 46447622

Start: 2369983

End: 2370258

Strand: Reverse

Name: 46447622

Synonym: pc1988

Alternate gene names: NA

Gene position: 2370258-2369983 (Counterclockwise)

Preceding gene: 46447630

Following gene: 46447621

Centisome position: 98.17

GC content: 28.62

Gene sequence:

>276_bases
ATGATAGTTATGTTTATTTTGATTCAATGTATTCACGGTTTTTTTCAAATTTATACTCTTATGCTATTTGCTCGCATTAT
TGCCTCATGGTTTCCTCAACTATATGAATACCGAGCTATGCAATTTATTACTTACTATACAGAGCCATATTTAAATTTTT
TCCGAAAATTTATTCCTCCTTTCGGAATGATGGATTTTAGTCCTATTGTGGCTTTTATTTGTTTGAGTTTTATACAAAAT
TTGCTAGTTAACTTTTTACTTGGTTTTATGCGTTAA

Upstream 100 bases:

>100_bases
TGGAAATTCATAAATTTAATTGCAAATCGTAATATAAATTTTGTATTATTTCAAGCAAGTATTTTATTTATAGTTACTTA
TATATCTTAATCTAAAATTA

Downstream 100 bases:

>100_bases
TGAAACAATATTTAGCTCCTATTCAAATTGGCTCTAAAAAGCTTCCTAATCGAATTTTTTATGCACCTTTAGCTGGGTGT
TCTGATTTTCCATTTCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: YGGT Family; UPF YGGT-Containing Protein

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MIVMFILIQCIHGFFQIYTLMLFARIIASWFPQLYEYRAMQFITYYTEPYLNFFRKFIPPFGMMDFSPIVAFICLSFIQN
LLVNFLLGFMR

Sequences:

>Translated_91_residues
MIVMFILIQCIHGFFQIYTLMLFARIIASWFPQLYEYRAMQFITYYTEPYLNFFRKFIPPFGMMDFSPIVAFICLSFIQN
LLVNFLLGFMR
>Mature_91_residues
MIVMFILIQCIHGFFQIYTLMLFARIIASWFPQLYEYRAMQFITYYTEPYLNFFRKFIPPFGMMDFSPIVAFICLSFIQN
LLVNFLLGFMR

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11055; Mature: 11055

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMFILIQCIHGFFQIYTLMLFARIIASWFPQLYEYRAMQFITYYTEPYLNFFRKFIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGMMDFSPIVAFICLSFIQNLLVNFLLGFMR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIVMFILIQCIHGFFQIYTLMLFARIIASWFPQLYEYRAMQFITYYTEPYLNFFRKFIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGMMDFSPIVAFICLSFIQNLLVNFLLGFMR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA