Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46447614

Identifier: 46447614

GI number: 46447614

Start: 2360301

End: 2360522

Strand: Direct

Name: 46447614

Synonym: pc1980

Alternate gene names: NA

Gene position: 2360301-2360522 (Clockwise)

Preceding gene: 46447607

Following gene: 46447615

Centisome position: 97.76

GC content: 32.43

Gene sequence:

>222_bases
TTGACTGCTAAACGCAAACTCTCTTCTCTTGCCTCTAAATTGAGTTTATTAACAGGAATATGTTTTAAACAATTATTAAG
ACCAAAACATCAACAAAGCCATTACCTGTTAGACAAGGAGTTCCCTCAAAAACAGGCAAAATATAGCATTGTAGACATCG
ATTTGCTTGTTCACAGACCACTTAAACGGTATAATTATTCTTTAATAAATTTTCATGCATGA

Upstream 100 bases:

>100_bases
AGCAACAAAACCACAACGAATTCAAAGGTCATCCTCTTTTAACTCGCTGTAATCCATCTAGGTTAAATTTCCTTCATTTA
TCAAAGCTGGTCTATAATAA

Downstream 100 bases:

>100_bases
TAAGAATAGCAATCTAACAAACTTCTTGGTTTTTAAAAAGTTTATTTCATAGATAAATTTTAAAATTAAAAAGATCAATA
TGGGAACGAATAAATAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTAKRKLSSLASKLSLLTGICFKQLLRPKHQQSHYLLDKEFPQKQAKYSIVDIDLLVHRPLKRYNYSLINFHA

Sequences:

>Translated_73_residues
MTAKRKLSSLASKLSLLTGICFKQLLRPKHQQSHYLLDKEFPQKQAKYSIVDIDLLVHRPLKRYNYSLINFHA
>Mature_72_residues
TAKRKLSSLASKLSLLTGICFKQLLRPKHQQSHYLLDKEFPQKQAKYSIVDIDLLVHRPLKRYNYSLINFHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8583; Mature: 8452

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKRKLSSLASKLSLLTGICFKQLLRPKHQQSHYLLDKEFPQKQAKYSIVDIDLLVHRP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCH
LKRYNYSLINFHA
HHHCCCCEEEECC
>Mature Secondary Structure 
TAKRKLSSLASKLSLLTGICFKQLLRPKHQQSHYLLDKEFPQKQAKYSIVDIDLLVHRP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCH
LKRYNYSLINFHA
HHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA