| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447607
Identifier: 46447607
GI number: 46447607
Start: 2353687
End: 2353902
Strand: Direct
Name: 46447607
Synonym: pc1973
Alternate gene names: NA
Gene position: 2353687-2353902 (Clockwise)
Preceding gene: 46447606
Following gene: 46447614
Centisome position: 97.48
GC content: 37.96
Gene sequence:
>216_bases TTGCCGAGGCTAAATCTCGGCAAGCGCATAAAACATTCAGCTATAGCTAAAGCTACAGTCGCGCAGGTGAAGCATTTTGA TTTCATCCATAAATGTAAAGTTTGTTCTATCGCTTATCACGAACAATGGCTCTCAATAACTGTGAACAGAGCAATCTTTA TCTTTGGGATTACCTCACTTGCATTTATCAAAAAGCAAGAAAGCTTTATGTCTTAA
Upstream 100 bases:
>100_bases TCATTTAAATTTTAAAAGTCTTTTTAAAGAGGGACGAGTTAAAAGCTAGTTTTTAACGCCAATAACTAGTTGCCGCGTTA AGTTAGCCATGTACTAAGAC
Downstream 100 bases:
>100_bases ATAGAATGGCCTTAGAAGTAATAAGCCATGCCAATTTTAGCTCCTTTTCCACGCAAACCGTGTTTTTCCCGAGAAAGGGT AATATTATATCCCACCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS
Sequences:
>Translated_71_residues MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS >Mature_70_residues PRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8150; Mature: 8019
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHH AFIKKQESFMS HHHHHHHHHCC >Mature Secondary Structure PRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHH AFIKKQESFMS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA