Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447607

Identifier: 46447607

GI number: 46447607

Start: 2353687

End: 2353902

Strand: Direct

Name: 46447607

Synonym: pc1973

Alternate gene names: NA

Gene position: 2353687-2353902 (Clockwise)

Preceding gene: 46447606

Following gene: 46447614

Centisome position: 97.48

GC content: 37.96

Gene sequence:

>216_bases
TTGCCGAGGCTAAATCTCGGCAAGCGCATAAAACATTCAGCTATAGCTAAAGCTACAGTCGCGCAGGTGAAGCATTTTGA
TTTCATCCATAAATGTAAAGTTTGTTCTATCGCTTATCACGAACAATGGCTCTCAATAACTGTGAACAGAGCAATCTTTA
TCTTTGGGATTACCTCACTTGCATTTATCAAAAAGCAAGAAAGCTTTATGTCTTAA

Upstream 100 bases:

>100_bases
TCATTTAAATTTTAAAAGTCTTTTTAAAGAGGGACGAGTTAAAAGCTAGTTTTTAACGCCAATAACTAGTTGCCGCGTTA
AGTTAGCCATGTACTAAGAC

Downstream 100 bases:

>100_bases
ATAGAATGGCCTTAGAAGTAATAAGCCATGCCAATTTTAGCTCCTTTTCCACGCAAACCGTGTTTTTCCCGAGAAAGGGT
AATATTATATCCCACCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS

Sequences:

>Translated_71_residues
MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS
>Mature_70_residues
PRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSLAFIKKQESFMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8150; Mature: 8019

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHH
AFIKKQESFMS
HHHHHHHHHCC
>Mature Secondary Structure 
PRLNLGKRIKHSAIAKATVAQVKHFDFIHKCKVCSIAYHEQWLSITVNRAIFIFGITSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHH
AFIKKQESFMS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA