| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447615
Identifier: 46447615
GI number: 46447615
Start: 2360965
End: 2361525
Strand: Direct
Name: 46447615
Synonym: pc1981
Alternate gene names: NA
Gene position: 2360965-2361525 (Clockwise)
Preceding gene: 46447614
Following gene: 46447623
Centisome position: 97.78
GC content: 37.97
Gene sequence:
>561_bases ATGCTTGCACAAATTCCTCGATCTGGTTTCGCTTTTTTAGGGACGGGGAAACAATCTATTGCTGAACATAGCTATCGAGT CTCTTTAGTTGCTCATGCCCTTGCCCATCTTATGGGCGGCCCCATCGATAGATATAAACTAGTCATGATGTGTTTATTAC ATGATTTACCAGAATCACGCATTGGCGATCTTAACTACGTTCAAAAAAAATATGTCACCCCCAATATTTCTAAAGCTCTT CACGATTTATCCAATGAATCTGTTTTAGGACCAGAAATAGTCAATTGGATTGAAGAGTATGAAAAAGGGGAATCCTTAGA AGCTCAAATCGCTCATGATGCCGATCAAATTGAGTTTCTTCTAGTCTTAAAAAGAGAACAAGAACTAGGTCATCAAAAAG CTTTAGAATGGTTTCAAAGAGTCAGGCAACGTATTAAAACAAAGGTTGGTATAAAATTGGTTGAAACTATTTTAGAAACA TCTACCGATCAGTGGTGGATAAAAAACCCGGATGACCCACATTGGATAGATGGAGGGAAAAAACCACACATACACTCTTA A
Upstream 100 bases:
>100_bases ATTTCTTGGATTTAATTAAACAATGAAGAGAACAATAAATTTATTTTGAGGGCTTATGAATCAATTTCGTCAAATTGTCA ATTTACTCAATGAAATTGGA
Downstream 100 bases:
>100_bases GTACTGTTTTGAAGTTAAACTGATAAACTTCAGAGTTCATTCATTTGATTAACGAATTAATTATTTGTTTGTTTACCCAC TAGTTTCGCCAAATAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase HD Region; Hydrolase; PIN Family xin-Antitoxin System Toxin Component
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLAQIPRSGFAFLGTGKQSIAEHSYRVSLVAHALAHLMGGPIDRYKLVMMCLLHDLPESRIGDLNYVQKKYVTPNISKAL HDLSNESVLGPEIVNWIEEYEKGESLEAQIAHDADQIEFLLVLKREQELGHQKALEWFQRVRQRIKTKVGIKLVETILET STDQWWIKNPDDPHWIDGGKKPHIHS
Sequences:
>Translated_186_residues MLAQIPRSGFAFLGTGKQSIAEHSYRVSLVAHALAHLMGGPIDRYKLVMMCLLHDLPESRIGDLNYVQKKYVTPNISKAL HDLSNESVLGPEIVNWIEEYEKGESLEAQIAHDADQIEFLLVLKREQELGHQKALEWFQRVRQRIKTKVGIKLVETILET STDQWWIKNPDDPHWIDGGKKPHIHS >Mature_186_residues MLAQIPRSGFAFLGTGKQSIAEHSYRVSLVAHALAHLMGGPIDRYKLVMMCLLHDLPESRIGDLNYVQKKYVTPNISKAL HDLSNESVLGPEIVNWIEEYEKGESLEAQIAHDADQIEFLLVLKREQELGHQKALEWFQRVRQRIKTKVGIKLVETILET STDQWWIKNPDDPHWIDGGKKPHIHS
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21309; Mature: 21309
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQIPRSGFAFLGTGKQSIAEHSYRVSLVAHALAHLMGGPIDRYKLVMMCLLHDLPESR CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH IGDLNYVQKKYVTPNISKALHDLSNESVLGPEIVNWIEEYEKGESLEAQIAHDADQIEFL CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHH LVLKREQELGHQKALEWFQRVRQRIKTKVGIKLVETILETSTDQWWIKNPDDPHWIDGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC KPHIHS CCCCCC >Mature Secondary Structure MLAQIPRSGFAFLGTGKQSIAEHSYRVSLVAHALAHLMGGPIDRYKLVMMCLLHDLPESR CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH IGDLNYVQKKYVTPNISKALHDLSNESVLGPEIVNWIEEYEKGESLEAQIAHDADQIEFL CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHH LVLKREQELGHQKALEWFQRVRQRIKTKVGIKLVETILETSTDQWWIKNPDDPHWIDGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC KPHIHS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA