| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447338
Identifier: 46447338
GI number: 46447338
Start: 2042177
End: 2043535
Strand: Direct
Name: 46447338
Synonym: pc1704
Alternate gene names: NA
Gene position: 2042177-2043535 (Clockwise)
Preceding gene: 46447336
Following gene: 46447339
Centisome position: 84.58
GC content: 31.42
Gene sequence:
>1359_bases ATGCCTCCAATAGGGCGTAAAACTAAAATTGTGTTAAGTGATTATCCTTACAAAAGAGATATCGAAAATCGTTTATTACT TTCACATTTAAGTATTCTAGAAGTCAAAATCTTGCAAGAAATCCTTCACTCTTCCCTGAAGATCTCTATTAAAGAGTTAG CAGAAGAATTAGAAATTTCTTCACCTATACTGATTTCGCACCTAGATAAACTTAGTGCAACGAAATTGTTCAAACGAAAT GAGTTGACTTTAATTGTTGATAAAGAAGTACGAAAGTATTTTGAAATTCAATTAGAGAAATTTGAAGAAGATTTTGAACC TAATCTAGAATTTTTGCAAAGCCTTCTTAATAAAGTTCCTATTCACGTTCTTCCTGTTTGGTATGCTATTCCTAGAAGTT CAGATCATATCTTTTCTTCTATTATTGAAAAATATTTTCAAACACCCAAAATGTATCGAGAATATTTAGGAGATCTTCAA TTTGAAGATCCTATTTTAAAAGAAATAATGAAAGATGTTTACGAAGCGCCAGATTTTACTATAACTGCAGTCGCTCTTAT TGATAAATATAAGCTCTCTAGAGAAAAATTCGAAGAGAACCTTTTACTACTCGAATACTACTTTGTATGTTGTTTAAGAT ATAAAAAAGTTGGTGAATACTGGGAAGAAATTGTTACTCCTTTTCATGAATACCATGAATACCTTCTCGTTAAAGCTCAG AATACGCCAAAAGCAATCGCTGATAAGTCAACAATTCAACATACACTTTCTACAGAATTTGGATATATCAGAGAAGTTGA AGCTATTCTTTCTAATTGTAAAAGTAAAAAAGAACTACATCTTCTATCAATGAATTATTTATCTAATTCAACAGAATTTA AATCATTAATTGATAAACTCGTTTATTTTGGTTTCCTAAAAAAAATTCAAGATATGATGGTTGCAACTGAAAAAGGAATG CTATGGTTAAAAAGACCTCCCATTGCGCAAATGACTTCACTTGCTTGGGATTGGTTAAGCGAACCTTTCGAAGCAGACGA TTTATCAATTTATTGGAATCCACGTAATTTTCGTTTAATTGAAAAATATCTCAAGCAATTCAAATATCATGATTGGGTTT ATTTGGAAGATTTCATTAAAAGTTTTATGGGCCCTATGGGAGATCGCGGACCTATCAATCTTGTTAACAAAGGAAAAAAA TGGAAATATGCTCTTCCCGTTTACCAATCGGAAGAGCTTAATTTTATTCGGGAAGTGATTACCAAAACTCTTTTCCAACT AGGGATTGTTTCAACAGGAATACATCAAAATCAAGTCTGTTTTACTGTCACTGCATTTGGACATCAGTTTATCCACTAA
Upstream 100 bases:
>100_bases AATAATTTCAATCAATAATCTTGTGATTCATGGGAATGAAATTTTTAAACATCCCCCGAAACTTCAGTAATTTTTTGTTA AAATAGGTGTGCCAATGAAT
Downstream 100 bases:
>100_bases AAACTAACCACCATTAACTTTTTGCGTATGTAGCTAACAAAAAATTTAATTTTGAAATTAGCACATACGTAAATTGCGCT ATTAGGATGGAAGGGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRN ELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQ FEDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGM LWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKK WKYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH
Sequences:
>Translated_452_residues MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRN ELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQ FEDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGM LWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKK WKYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH >Mature_451_residues PPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEISSPILISHLDKLSATKLFKRNE LTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVPIHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQF EDPILKEIMKDVYEAPDFTITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQN TPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKLVYFGFLKKIQDMMVATEKGML WLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLIEKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKW KYALPVYQSEELNFIREVITKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53469; Mature: 53338
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEIS CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPILISHLDKLSATKLFKRNELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVP CCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC IHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQFEDPILKEIMKDVYEAPDFT EEEEEHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCE ITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHH VYFGFLKKIQDMMVATEKGMLWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLI HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH EKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKWKYALPVYQSEELNFIREVI HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH TKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCC >Mature Secondary Structure PPIGRKTKIVLSDYPYKRDIENRLLLSHLSILEVKILQEILHSSLKISIKELAEELEIS CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPILISHLDKLSATKLFKRNELTLIVDKEVRKYFEIQLEKFEEDFEPNLEFLQSLLNKVP CCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC IHVLPVWYAIPRSSDHIFSSIIEKYFQTPKMYREYLGDLQFEDPILKEIMKDVYEAPDFT EEEEEHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCE ITAVALIDKYKLSREKFEENLLLLEYYFVCCLRYKKVGEYWEEIVTPFHEYHEYLLVKAQ EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NTPKAIADKSTIQHTLSTEFGYIREVEAILSNCKSKKELHLLSMNYLSNSTEFKSLIDKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHH VYFGFLKKIQDMMVATEKGMLWLKRPPIAQMTSLAWDWLSEPFEADDLSIYWNPRNFRLI HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH EKYLKQFKYHDWVYLEDFIKSFMGPMGDRGPINLVNKGKKWKYALPVYQSEELNFIREVI HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH TKTLFQLGIVSTGIHQNQVCFTVTAFGHQFIH HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA