Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447151

Identifier: 46447151

GI number: 46447151

Start: 1816476

End: 1817690

Strand: Direct

Name: 46447151

Synonym: pc1517

Alternate gene names: NA

Gene position: 1816476-1817690 (Clockwise)

Preceding gene: 46447150

Following gene: 46447152

Centisome position: 75.23

GC content: 40.74

Gene sequence:

>1215_bases
ATGCAAATTTCATCCATTACGTTTGGAGATCATTTAGATCAGGTTCTTGACAAAGCCCAAAAACTCGCTACAAGTTATCA
AGATCAGGGAGCTTATTCCAAGATAGAGGGAGTTTACCAGCTTAGGCAAACGCTTGAAAACACTAAAGTCGCTTATAACC
ATATTCTGGGCACTCAACTGGAAAAGGTAGATGCTAAAGCACGAGAAATTTTAACAGATCTCGAGCAACTGACAGCTGAT
GTGGAGGCAAAAACGGCAAAGACTTTAGAGCAATTGGCTATCCGAGCGCAAGAGATTTTCAACCGCTTGCCCTTTCATGA
AGACCAACCTCGATTAACAGGTCTTTTACCACGCTTTATCTTAAGATCTGATGCCAAGCCTATTTGTTTCAAATTTTCTG
GCTATTTCAAAAATAATTTTCAAGCTGATTTAGAGCCTCAATTGTGTTTTCAAGGTATAAAATACAAACCGTCTAAAATT
ACTCCCTATCAACTAGAGTTTAGCCTCATCCCTAATGCTGTTTTTACTTCAGAGAAAGTTCCTTCTGCTGAAAAATTTAC
CTTTGCGGAAGGTAACTTAGAAATCCCTTTGAGTTCTAAATCCACTGCAATCTACAAAGTGACCCTTGGTGCTTTTCCTA
CCTCCCCTGGTACCATCACAAAGCATTGGACGACCGATAGTGTTGTTACTGCTACAACAACTAGAAGAGTACGTCATTTA
ATTAGTTCAGAAAAAGAGCATGGTAACGATGACCAAATTAGATCTCGTTTTTCTGCACACGCAGATAGTGGTTGGACAAT
CCAATCGCATTCAATTGAAATGCATGCCTGCAGGGGGGATGAGCCAGCTGATCGCAATTCTCCTGCTTGCGTTAGCGCAG
ATGCCAACAGCGTGACCTATGAGGCAACTACGAGACATAAAACGTGGGGATGTTCGGGTCATATGGAGTTTTCTATCGTC
TTAAATCAGTCCCAAAAACAGACGGTAATAAATCATCACAATCCTGCCCCTGAGACTTTAGCTTGGGGAAAGGAAATTCC
TTTAAATCACCCAGAGGGTAGATGGGATGTTACATTCGATGCGTTTGATGGCTCAACTCCTGTCTATTGCAAGGCAGATA
CGACTCAATCTCCTTATCTCCAGATTGTAACAAATGAAACAAAAACAGGATTTATAATCAAGCCACTTAAACTTAGCGAA
TTAGAAAATATCTAG

Upstream 100 bases:

>100_bases
ATTCAAATTGGTTCCAAAAGATCAAGTGAGCGATACTGTCCGCCTCATCAAATGCCAGTGGCCTCTTTCCTAAAAAAATA
AATAAAAATGAGGTAAAAGT

Downstream 100 bases:

>100_bases
ATTAAATTTTTTAATTTTTCAATGTGAGGAAAAAAATGGCAATTCCAGCAGGTATCACTACGGGTCTCCTTTTAAATCAA
TTTTTTGATCGGACTCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MQISSITFGDHLDQVLDKAQKLATSYQDQGAYSKIEGVYQLRQTLENTKVAYNHILGTQLEKVDAKAREILTDLEQLTAD
VEAKTAKTLEQLAIRAQEIFNRLPFHEDQPRLTGLLPRFILRSDAKPICFKFSGYFKNNFQADLEPQLCFQGIKYKPSKI
TPYQLEFSLIPNAVFTSEKVPSAEKFTFAEGNLEIPLSSKSTAIYKVTLGAFPTSPGTITKHWTTDSVVTATTTRRVRHL
ISSEKEHGNDDQIRSRFSAHADSGWTIQSHSIEMHACRGDEPADRNSPACVSADANSVTYEATTRHKTWGCSGHMEFSIV
LNQSQKQTVINHHNPAPETLAWGKEIPLNHPEGRWDVTFDAFDGSTPVYCKADTTQSPYLQIVTNETKTGFIIKPLKLSE
LENI

Sequences:

>Translated_404_residues
MQISSITFGDHLDQVLDKAQKLATSYQDQGAYSKIEGVYQLRQTLENTKVAYNHILGTQLEKVDAKAREILTDLEQLTAD
VEAKTAKTLEQLAIRAQEIFNRLPFHEDQPRLTGLLPRFILRSDAKPICFKFSGYFKNNFQADLEPQLCFQGIKYKPSKI
TPYQLEFSLIPNAVFTSEKVPSAEKFTFAEGNLEIPLSSKSTAIYKVTLGAFPTSPGTITKHWTTDSVVTATTTRRVRHL
ISSEKEHGNDDQIRSRFSAHADSGWTIQSHSIEMHACRGDEPADRNSPACVSADANSVTYEATTRHKTWGCSGHMEFSIV
LNQSQKQTVINHHNPAPETLAWGKEIPLNHPEGRWDVTFDAFDGSTPVYCKADTTQSPYLQIVTNETKTGFIIKPLKLSE
LENI
>Mature_404_residues
MQISSITFGDHLDQVLDKAQKLATSYQDQGAYSKIEGVYQLRQTLENTKVAYNHILGTQLEKVDAKAREILTDLEQLTAD
VEAKTAKTLEQLAIRAQEIFNRLPFHEDQPRLTGLLPRFILRSDAKPICFKFSGYFKNNFQADLEPQLCFQGIKYKPSKI
TPYQLEFSLIPNAVFTSEKVPSAEKFTFAEGNLEIPLSSKSTAIYKVTLGAFPTSPGTITKHWTTDSVVTATTTRRVRHL
ISSEKEHGNDDQIRSRFSAHADSGWTIQSHSIEMHACRGDEPADRNSPACVSADANSVTYEATTRHKTWGCSGHMEFSIV
LNQSQKQTVINHHNPAPETLAWGKEIPLNHPEGRWDVTFDAFDGSTPVYCKADTTQSPYLQIVTNETKTGFIIKPLKLSE
LENI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45324; Mature: 45324

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISSITFGDHLDQVLDKAQKLATSYQDQGAYSKIEGVYQLRQTLENTKVAYNHILGTQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVDAKAREILTDLEQLTADVEAKTAKTLEQLAIRAQEIFNRLPFHEDQPRLTGLLPRFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LRSDAKPICFKFSGYFKNNFQADLEPQLCFQGIKYKPSKITPYQLEFSLIPNAVFTSEKV
HHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHCCCCCC
PSAEKFTFAEGNLEIPLSSKSTAIYKVTLGAFPTSPGTITKHWTTDSVVTATTTRRVRHL
CCCCCEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEHHHHHHHHHH
ISSEKEHGNDDQIRSRFSAHADSGWTIQSHSIEMHACRGDEPADRNSPACVSADANSVTY
HHHHHCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCCCEEE
EATTRHKTWGCSGHMEFSIVLNQSQKQTVINHHNPAPETLAWGKEIPLNHPEGRWDVTFD
EEECCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEEE
AFDGSTPVYCKADTTQSPYLQIVTNETKTGFIIKPLKLSELENI
CCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHHCCC
>Mature Secondary Structure
MQISSITFGDHLDQVLDKAQKLATSYQDQGAYSKIEGVYQLRQTLENTKVAYNHILGTQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVDAKAREILTDLEQLTADVEAKTAKTLEQLAIRAQEIFNRLPFHEDQPRLTGLLPRFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LRSDAKPICFKFSGYFKNNFQADLEPQLCFQGIKYKPSKITPYQLEFSLIPNAVFTSEKV
HHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHCCCCCC
PSAEKFTFAEGNLEIPLSSKSTAIYKVTLGAFPTSPGTITKHWTTDSVVTATTTRRVRHL
CCCCCEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEHHHHHHHHHH
ISSEKEHGNDDQIRSRFSAHADSGWTIQSHSIEMHACRGDEPADRNSPACVSADANSVTY
HHHHHCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCCCEEE
EATTRHKTWGCSGHMEFSIVLNQSQKQTVINHHNPAPETLAWGKEIPLNHPEGRWDVTFD
EEECCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEEE
AFDGSTPVYCKADTTQSPYLQIVTNETKTGFIIKPLKLSELENI
CCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA