Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447152

Identifier: 46447152

GI number: 46447152

Start: 1817726

End: 1818958

Strand: Direct

Name: 46447152

Synonym: pc1518

Alternate gene names: NA

Gene position: 1817726-1818958 (Clockwise)

Preceding gene: 46447151

Following gene: 46447153

Centisome position: 75.28

GC content: 41.52

Gene sequence:

>1233_bases
ATGGCAATTCCAGCAGGTATCACTACGGGTCTCCTTTTAAATCAATTTTTTGATCGGACTCAACAAACTATCGATCAATT
GAAAAATGCTGGCCTTCATCTTGAAATGGAAGCCGGGGCACAACTGCGCCAAACGATTGAACAAGCTAAAGTAGCTTATG
CAGACTCACTAAATCTCACCATGGATCGCGTCGATGCCACTACTCGTAATACCTTTGACCAGCTTGAGACCTTGGTTAGT
GGTGTTCAAGCAAGAAATGCTACTTTGATGAAGAATATGGCTGCCAGCGCTCAACAGATTGCTAATACTCTTCCTTTTCA
TAATGATCGTCCTCAGTTAACGACTGTACTGCCCCGGTTCATATTAAGAACAGATCAAACGCCTATCTTATTTCAGTTTT
TTGGAAATTTTGAACGTGCGGCTGAGCAGGCTTATGCCCCTAAGTTAACTTTTCATGGACAAGATTTTACAGCTACTCAT
ATCACGATACAGAAACTTGAGTTTAGTGTTTTACCGACCGCAGTTTTTCCAGGCAATCAACTACAAAATGCTAAGGGAGT
GGTTTACAGCGAGGGAACTTTAGAAACCTACTATCCGGGAACAGTATTTGGTAGAACAGCTGCTGTTTTTCATCTTACCA
TTGGAGCCTTGCCTCCCTCCCCTGGCACTCTTACTCTTGAATACAGACGAGATCGCGTTCAACGAGAAGAGCGCCTTTGT
CAAACACAAAAGCAACATATTGGTTCTCGCAAGAATGAAGGAAACAACGATGTAATAAATCATCTCTTCAAAGCAACACC
TAGCGAAGGATGGCATGTTAAAAAAGGAACATCTGAGGCGAATCCTTCTTGTGGCGGTAGACATACAGGTCCTGACTTTG
TTTCAGATGATGGAGACCAAGTGCTCTGGAGAGGTTCAACAATCAAAAATACGATGGATTTGGGATCTGAATCAGGATGG
ATGGATGTTACAATTAGCTTTATAGAGTGGCAAGATCAAATTGTGACGGAACAATTCACGGAAACTATAGATTTAAAATG
GGGAAATACGAAGGTCCTTCAAGCAGCAGATTTTCCCCTTGGGAAATGGAAGCTTATCTTTGATTCTTTTGATGGCGATC
ATCATGAATTTGCAGGAACAGATATCGATACTTCACCTTACTTAAAAATTAAAAACCAAGGGGGCGGATTCGTTATCAAA
GCTGTAAAGCCCAAAGAATTAGACAGTATTTGA

Upstream 100 bases:

>100_bases
CAAATGAAACAAAAACAGGATTTATAATCAAGCCACTTAAACTTAGCGAATTAGAAAATATCTAGATTAAATTTTTTAAT
TTTTCAATGTGAGGAAAAAA

Downstream 100 bases:

>100_bases
ACAAAGGAATAATGTTTCTACAGCTGTTAGGTAAGCCAGAGTTGAAGTACTATTCGCCCCTATTCTGAGCACAAATTTCA
GCTAGCTGAGCTCATCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAIPAGITTGLLLNQFFDRTQQTIDQLKNAGLHLEMEAGAQLRQTIEQAKVAYADSLNLTMDRVDATTRNTFDQLETLVS
GVQARNATLMKNMAASAQQIANTLPFHNDRPQLTTVLPRFILRTDQTPILFQFFGNFERAAEQAYAPKLTFHGQDFTATH
ITIQKLEFSVLPTAVFPGNQLQNAKGVVYSEGTLETYYPGTVFGRTAAVFHLTIGALPPSPGTLTLEYRRDRVQREERLC
QTQKQHIGSRKNEGNNDVINHLFKATPSEGWHVKKGTSEANPSCGGRHTGPDFVSDDGDQVLWRGSTIKNTMDLGSESGW
MDVTISFIEWQDQIVTEQFTETIDLKWGNTKVLQAADFPLGKWKLIFDSFDGDHHEFAGTDIDTSPYLKIKNQGGGFVIK
AVKPKELDSI

Sequences:

>Translated_410_residues
MAIPAGITTGLLLNQFFDRTQQTIDQLKNAGLHLEMEAGAQLRQTIEQAKVAYADSLNLTMDRVDATTRNTFDQLETLVS
GVQARNATLMKNMAASAQQIANTLPFHNDRPQLTTVLPRFILRTDQTPILFQFFGNFERAAEQAYAPKLTFHGQDFTATH
ITIQKLEFSVLPTAVFPGNQLQNAKGVVYSEGTLETYYPGTVFGRTAAVFHLTIGALPPSPGTLTLEYRRDRVQREERLC
QTQKQHIGSRKNEGNNDVINHLFKATPSEGWHVKKGTSEANPSCGGRHTGPDFVSDDGDQVLWRGSTIKNTMDLGSESGW
MDVTISFIEWQDQIVTEQFTETIDLKWGNTKVLQAADFPLGKWKLIFDSFDGDHHEFAGTDIDTSPYLKIKNQGGGFVIK
AVKPKELDSI
>Mature_409_residues
AIPAGITTGLLLNQFFDRTQQTIDQLKNAGLHLEMEAGAQLRQTIEQAKVAYADSLNLTMDRVDATTRNTFDQLETLVSG
VQARNATLMKNMAASAQQIANTLPFHNDRPQLTTVLPRFILRTDQTPILFQFFGNFERAAEQAYAPKLTFHGQDFTATHI
TIQKLEFSVLPTAVFPGNQLQNAKGVVYSEGTLETYYPGTVFGRTAAVFHLTIGALPPSPGTLTLEYRRDRVQREERLCQ
TQKQHIGSRKNEGNNDVINHLFKATPSEGWHVKKGTSEANPSCGGRHTGPDFVSDDGDQVLWRGSTIKNTMDLGSESGWM
DVTISFIEWQDQIVTEQFTETIDLKWGNTKVLQAADFPLGKWKLIFDSFDGDHHEFAGTDIDTSPYLKIKNQGGGFVIKA
VKPKELDSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45669; Mature: 45538

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPAGITTGLLLNQFFDRTQQTIDQLKNAGLHLEMEAGAQLRQTIEQAKVAYADSLNLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC
MDRVDATTRNTFDQLETLVSGVQARNATLMKNMAASAQQIANTLPFHNDRPQLTTVLPRF
HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILRTDQTPILFQFFGNFERAAEQAYAPKLTFHGQDFTATHITIQKLEFSVLPTAVFPGNQ
HHCCCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCEEEEEEEEEEEEEEEECCEECCCCC
LQNAKGVVYSEGTLETYYPGTVFGRTAAVFHLTIGALPPSPGTLTLEYRRDRVQREERLC
CCCCCCEEEECCCEEEECCCCHHHCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHH
QTQKQHIGSRKNEGNNDVINHLFKATPSEGWHVKKGTSEANPSCGGRHTGPDFVSDDGDQ
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
VLWRGSTIKNTMDLGSESGWMDVTISFIEWQDQIVTEQFTETIDLKWGNTKVLQAADFPL
EEEECCCHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
GKWKLIFDSFDGDHHEFAGTDIDTSPYLKIKNQGGGFVIKAVKPKELDSI
CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
AIPAGITTGLLLNQFFDRTQQTIDQLKNAGLHLEMEAGAQLRQTIEQAKVAYADSLNLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC
MDRVDATTRNTFDQLETLVSGVQARNATLMKNMAASAQQIANTLPFHNDRPQLTTVLPRF
HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILRTDQTPILFQFFGNFERAAEQAYAPKLTFHGQDFTATHITIQKLEFSVLPTAVFPGNQ
HHCCCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCEEEEEEEEEEEEEEEECCEECCCCC
LQNAKGVVYSEGTLETYYPGTVFGRTAAVFHLTIGALPPSPGTLTLEYRRDRVQREERLC
CCCCCCEEEECCCEEEECCCCHHHCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHH
QTQKQHIGSRKNEGNNDVINHLFKATPSEGWHVKKGTSEANPSCGGRHTGPDFVSDDGDQ
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
VLWRGSTIKNTMDLGSESGWMDVTISFIEWQDQIVTEQFTETIDLKWGNTKVLQAADFPL
EEEECCCHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
GKWKLIFDSFDGDHHEFAGTDIDTSPYLKIKNQGGGFVIKAVKPKELDSI
CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA