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The map label for this gene is oppA [H]

Identifier: 46447136

GI number: 46447136

Start: 1790142

End: 1791725

Strand: Direct

Name: oppA [H]

Synonym: pc1502

Alternate gene names: 46447136

Gene position: 1790142-1791725 (Clockwise)

Preceding gene: 46447134

Following gene: 46447137

Centisome position: 74.14

GC content: 35.1

Gene sequence:

>1584_bases
ATGTTAAAAAAATATTTACCTATTTTTTTTCTTTTTTTGATTCCTTTATTTACTGGCTGCGATAGAAAAATTAAACCTAC
AAGGGCAGAAGAGCAAATTTTTCGTATAAGTTGCGAATCTGATTTACTAACATTAGATCCTCGACTTGTGAGAGACTTAG
GCTCTATTACTGTTATGCAGGCACTATATGAAGGGCTGACAAGAATACAAGCAGATGGAACAATTACGTTGGCTAATGCT
GAAACAGTTACTCTTTCTCCCGATCATAAAACCTATACCTTTAAATTGCGTTCTAATGAATGGTCAAATGGAGATCCAGT
TACTGCTTATGATTTTGAAGAGAGCTGGAAAAGTGTTCTATCTCCCCAATTTCCCTCTCCGAATGCCTATCAACTATACG
TTATTAAAGGAGCTCAGGAGGCGAAAGAAGGCACGGCTAACTTAGATCAAGTAGGTATTTATGCTAAAGATAAGCAAACA
TTGATTGTAGAATTAAAAAATCCTACACCCTACTTTCTTAATCTTACTGCGACACACTTTTTTTTTCCTGTCCACGCAGG
TTTAAGAAACCAACCTCATCCTTCTAACTCTTTTTACTCAACTAACGGCCCTTTTAAAATTGATAGTTGGACAAATGACC
TATCCATTATCCCTCACGTTGGTTACTGGGACAACTCCGCAATCAAATTAAACAAAATCATTTTTAACACCTTGGATAAT
CCAACTGCTTTACAATTATTTCAAAATCACAAACTTGATTGGACCGGTTCCCCACTTTCAACCATTTCCATAGATGCTTT
AATTGCTTTAAAAAAGAGTAAAAACTTTCACGTTACTCCAGCAGCAGGAATACATCTCTTTCGAGTTAATACTTCTAAAT
TTCCTCTTGATCAGATAAAAATAAGGCAAGCTTTAGCTTTAGCTTTAAATCGAAAGGAGTTAGTTGAACATGTCTTACAA
GGCAACCAAGAACCTGCAACAGGATTAGTCCCTCCTACATGGCTCAAAACCTCCGTTTTCTTTCAAGATGGAAATGATAG
AATGGCTCAGCAACTTTTTAACGAAGCCCTTAAAAAGAACAATTTAGGCTTGCAAAATTTTCCTAAATTGATTTTGTGTT
ATGCATCAGGAGAGCGTCCTCATAAAATTGCACAAGTTGTCCAACAACAGTGGAAAAACGTTTTGGGAATCAACGTACAA
TTACAAGCTTATGAAAGTAAAGTTTATTTTGACCTTCTGAAAAAACAAGACTATCAAATAGGAATTGGATCTTGGTATGC
TGATTTTCGCGATCCCATCTCTTTTTTAGATGTTTTTAAATTTAGGAATAACGGGACAAACAATACAGGTTGGGAAAACC
AGCATTACATCGATTTACTCACAAAAGGTTCACAGGAAACTTCTCCTAACCAAAGAAATCAATTATTAATTGAGGCTGAA
AAATTACTCATCCAAGAGATGCCAATCATTCCTCTATTTTTTGGATCGTACAATTATTTGAAAAAAGAAAATGTCCATGA
CGTTTATTTTTCAGAACTTGGTTATCTAGATTTGAAAAAAGCTTATCTTAGCCCCCTTAATTAA

Upstream 100 bases:

>100_bases
AATTTAAACAATTTCATTTCCACTATTTATACACAGACAAATCGAAAAATTATAGTGAGACATAACAATCTAGACTAGAT
GCAAAAAAAGAGGCTATTTT

Downstream 100 bases:

>100_bases
AGATTGCTATGTACCACGTCTATTTTTGTAGAAAATTTATTTATTTACTTAGCTCTCTTTGGATCATTATAACTTTAACT
TTCATCCTTATGAAAGCTGT

Product: oligo/dipeptide-binding protein oppA

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MLKKYLPIFFLFLIPLFTGCDRKIKPTRAEEQIFRISCESDLLTLDPRLVRDLGSITVMQALYEGLTRIQADGTITLANA
ETVTLSPDHKTYTFKLRSNEWSNGDPVTAYDFEESWKSVLSPQFPSPNAYQLYVIKGAQEAKEGTANLDQVGIYAKDKQT
LIVELKNPTPYFLNLTATHFFFPVHAGLRNQPHPSNSFYSTNGPFKIDSWTNDLSIIPHVGYWDNSAIKLNKIIFNTLDN
PTALQLFQNHKLDWTGSPLSTISIDALIALKKSKNFHVTPAAGIHLFRVNTSKFPLDQIKIRQALALALNRKELVEHVLQ
GNQEPATGLVPPTWLKTSVFFQDGNDRMAQQLFNEALKKNNLGLQNFPKLILCYASGERPHKIAQVVQQQWKNVLGINVQ
LQAYESKVYFDLLKKQDYQIGIGSWYADFRDPISFLDVFKFRNNGTNNTGWENQHYIDLLTKGSQETSPNQRNQLLIEAE
KLLIQEMPIIPLFFGSYNYLKKENVHDVYFSELGYLDLKKAYLSPLN

Sequences:

>Translated_527_residues
MLKKYLPIFFLFLIPLFTGCDRKIKPTRAEEQIFRISCESDLLTLDPRLVRDLGSITVMQALYEGLTRIQADGTITLANA
ETVTLSPDHKTYTFKLRSNEWSNGDPVTAYDFEESWKSVLSPQFPSPNAYQLYVIKGAQEAKEGTANLDQVGIYAKDKQT
LIVELKNPTPYFLNLTATHFFFPVHAGLRNQPHPSNSFYSTNGPFKIDSWTNDLSIIPHVGYWDNSAIKLNKIIFNTLDN
PTALQLFQNHKLDWTGSPLSTISIDALIALKKSKNFHVTPAAGIHLFRVNTSKFPLDQIKIRQALALALNRKELVEHVLQ
GNQEPATGLVPPTWLKTSVFFQDGNDRMAQQLFNEALKKNNLGLQNFPKLILCYASGERPHKIAQVVQQQWKNVLGINVQ
LQAYESKVYFDLLKKQDYQIGIGSWYADFRDPISFLDVFKFRNNGTNNTGWENQHYIDLLTKGSQETSPNQRNQLLIEAE
KLLIQEMPIIPLFFGSYNYLKKENVHDVYFSELGYLDLKKAYLSPLN
>Mature_527_residues
MLKKYLPIFFLFLIPLFTGCDRKIKPTRAEEQIFRISCESDLLTLDPRLVRDLGSITVMQALYEGLTRIQADGTITLANA
ETVTLSPDHKTYTFKLRSNEWSNGDPVTAYDFEESWKSVLSPQFPSPNAYQLYVIKGAQEAKEGTANLDQVGIYAKDKQT
LIVELKNPTPYFLNLTATHFFFPVHAGLRNQPHPSNSFYSTNGPFKIDSWTNDLSIIPHVGYWDNSAIKLNKIIFNTLDN
PTALQLFQNHKLDWTGSPLSTISIDALIALKKSKNFHVTPAAGIHLFRVNTSKFPLDQIKIRQALALALNRKELVEHVLQ
GNQEPATGLVPPTWLKTSVFFQDGNDRMAQQLFNEALKKNNLGLQNFPKLILCYASGERPHKIAQVVQQQWKNVLGINVQ
LQAYESKVYFDLLKKQDYQIGIGSWYADFRDPISFLDVFKFRNNGTNNTGWENQHYIDLLTKGSQETSPNQRNQLLIEAE
KLLIQEMPIIPLFFGSYNYLKKENVHDVYFSELGYLDLKKAYLSPLN

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=510, Percent_Identity=29.8039215686275, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI1789397, Length=498, Percent_Identity=29.718875502008, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1787495, Length=491, Percent_Identity=26.8839103869654, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1787052, Length=474, Percent_Identity=24.6835443037975, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787762, Length=523, Percent_Identity=23.1357552581262, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789966, Length=300, Percent_Identity=24, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789887, Length=286, Percent_Identity=26.2237762237762, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60178; Mature: 60178

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKYLPIFFLFLIPLFTGCDRKIKPTRAEEQIFRISCESDLLTLDPRLVRDLGSITVMQ
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHH
ALYEGLTRIQADGTITLANAETVTLSPDHKTYTFKLRSNEWSNGDPVTAYDFEESWKSVL
HHHHHHHEEECCCEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCEEEECHHHHHHHHH
SPQFPSPNAYQLYVIKGAQEAKEGTANLDQVGIYAKDKQTLIVELKNPTPYFLNLTATHF
CCCCCCCCCEEEEEEECCHHHHCCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEEEE
FFPVHAGLRNQPHPSNSFYSTNGPFKIDSWTNDLSIIPHVGYWDNSAIKLNKIIFNTLDN
EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCEEEEEEEEECCCC
PTALQLFQNHKLDWTGSPLSTISIDALIALKKSKNFHVTPAAGIHLFRVNTSKFPLDQIK
CHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCHHHHH
IRQALALALNRKELVEHVLQGNQEPATGLVPPTWLKTSVFFQDGNDRMAQQLFNEALKKN
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHC
NLGLQNFPKLILCYASGERPHKIAQVVQQQWKNVLGINVQLQAYESKVYFDLLKKQDYQI
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCCCEE
GIGSWYADFRDPISFLDVFKFRNNGTNNTGWENQHYIDLLTKGSQETSPNQRNQLLIEAE
ECCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEHHHH
KLLIQEMPIIPLFFGSYNYLKKENVHDVYFSELGYLDLKKAYLSPLN
HHHHHHCCCEEEEECCCCHHCCCCCCHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLKKYLPIFFLFLIPLFTGCDRKIKPTRAEEQIFRISCESDLLTLDPRLVRDLGSITVMQ
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHH
ALYEGLTRIQADGTITLANAETVTLSPDHKTYTFKLRSNEWSNGDPVTAYDFEESWKSVL
HHHHHHHEEECCCEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCEEEECHHHHHHHHH
SPQFPSPNAYQLYVIKGAQEAKEGTANLDQVGIYAKDKQTLIVELKNPTPYFLNLTATHF
CCCCCCCCCEEEEEEECCHHHHCCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEEEE
FFPVHAGLRNQPHPSNSFYSTNGPFKIDSWTNDLSIIPHVGYWDNSAIKLNKIIFNTLDN
EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCEEEEEEEEECCCC
PTALQLFQNHKLDWTGSPLSTISIDALIALKKSKNFHVTPAAGIHLFRVNTSKFPLDQIK
CHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCHHHHH
IRQALALALNRKELVEHVLQGNQEPATGLVPPTWLKTSVFFQDGNDRMAQQLFNEALKKN
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHC
NLGLQNFPKLILCYASGERPHKIAQVVQQQWKNVLGINVQLQAYESKVYFDLLKKQDYQI
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCCCEE
GIGSWYADFRDPISFLDVFKFRNNGTNNTGWENQHYIDLLTKGSQETSPNQRNQLLIEAE
ECCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEHHHH
KLLIQEMPIIPLFFGSYNYLKKENVHDVYFSELGYLDLKKAYLSPLN
HHHHHHCCCEEEEECCCCHHCCCCCCHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]