Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447134

Identifier: 46447134

GI number: 46447134

Start: 1788344

End: 1789045

Strand: Direct

Name: 46447134

Synonym: pc1500

Alternate gene names: NA

Gene position: 1788344-1789045 (Clockwise)

Preceding gene: 46447133

Following gene: 46447136

Centisome position: 74.07

GC content: 33.48

Gene sequence:

>702_bases
ATGAGTTCAAGTCTCAAACTTTTACTAGCAAAAATATGCCCTTACAGTGATTACAGCCTTATTTTAGATAATCGTCATTT
TTATAGCTGGAAAAAACCTTATTTATCCTATGATAGTCATAAAGGCTGGAGCCTGGAACGTTTAAATATCTTTCAACGCA
TTGTTAGAAGCCTTTTCAAATTATATTCTCATACACATTTTTCTCACATTGGTTGGCGTTTAAGCCGTGAAACTGATATT
GATCCTTTATTCATTCAAAATATGCAAAAATGTTGGGAAACAGCTTATCCGAAAAAAATATGTCCTTTTTTTACCTTCAC
CCCCTACCTATTGTATGATTCGATAAAAGAGATGCTAGAGCTTAAGTCTGTTCAAAAAGTTAATAAAGCTCAAAATAATA
CCATACAAGAATTCATTATTGATCATATTAATATTGGATGCACGACTGAAACGATTCTGCAATTGTTAAAAGATGGTCAA
AGCGATAAAGATTCCAATCGCAACCTGATTTGTACTATAGGTTTGATCATAGATCTGCATAGGCACTCTTATTTAGAGGC
AGACATTTTACGCGTTTTTCAAGGTTCGGGTTACGAAAAAAGAGATATTCAATCGATGTTTGCTTTAGTTAAGCAACGAT
GTGATAATCAAAGTTATGATAGAGATTATATTCCCCCATGCCAGAATAACCTCACAGGATAG

Upstream 100 bases:

>100_bases
AACAAATACAGTTATCTATAACCCATCTAAATAAAATATACTTCTTAATAATTAGTTAATAAATTAATATATTTAATTCA
ATTATTACTAAGGTATTCAA

Downstream 100 bases:

>100_bases
AATTATTTGCATTAACTGACTTGATATAAGTTTATCCTTGATCTTTCACACTCTTTCAATCAATTAATATGGATTGAATA
CCTTTGTTTTTCCTTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDI
DPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQ
SDKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG

Sequences:

>Translated_233_residues
MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDI
DPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQ
SDKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG
>Mature_232_residues
SSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDID
PLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQS
DKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27509; Mature: 27378

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFK
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LYSHTHFSHIGWRLSRETDIDPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLE
HHHCCHHHHHCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH
LKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQSDKDSNRNLICTIGLIIDLH
HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH
RHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFK
CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LYSHTHFSHIGWRLSRETDIDPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLE
HHHCCHHHHHCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH
LKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQSDKDSNRNLICTIGLIIDLH
HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH
RHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA