| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447134
Identifier: 46447134
GI number: 46447134
Start: 1788344
End: 1789045
Strand: Direct
Name: 46447134
Synonym: pc1500
Alternate gene names: NA
Gene position: 1788344-1789045 (Clockwise)
Preceding gene: 46447133
Following gene: 46447136
Centisome position: 74.07
GC content: 33.48
Gene sequence:
>702_bases ATGAGTTCAAGTCTCAAACTTTTACTAGCAAAAATATGCCCTTACAGTGATTACAGCCTTATTTTAGATAATCGTCATTT TTATAGCTGGAAAAAACCTTATTTATCCTATGATAGTCATAAAGGCTGGAGCCTGGAACGTTTAAATATCTTTCAACGCA TTGTTAGAAGCCTTTTCAAATTATATTCTCATACACATTTTTCTCACATTGGTTGGCGTTTAAGCCGTGAAACTGATATT GATCCTTTATTCATTCAAAATATGCAAAAATGTTGGGAAACAGCTTATCCGAAAAAAATATGTCCTTTTTTTACCTTCAC CCCCTACCTATTGTATGATTCGATAAAAGAGATGCTAGAGCTTAAGTCTGTTCAAAAAGTTAATAAAGCTCAAAATAATA CCATACAAGAATTCATTATTGATCATATTAATATTGGATGCACGACTGAAACGATTCTGCAATTGTTAAAAGATGGTCAA AGCGATAAAGATTCCAATCGCAACCTGATTTGTACTATAGGTTTGATCATAGATCTGCATAGGCACTCTTATTTAGAGGC AGACATTTTACGCGTTTTTCAAGGTTCGGGTTACGAAAAAAGAGATATTCAATCGATGTTTGCTTTAGTTAAGCAACGAT GTGATAATCAAAGTTATGATAGAGATTATATTCCCCCATGCCAGAATAACCTCACAGGATAG
Upstream 100 bases:
>100_bases AACAAATACAGTTATCTATAACCCATCTAAATAAAATATACTTCTTAATAATTAGTTAATAAATTAATATATTTAATTCA ATTATTACTAAGGTATTCAA
Downstream 100 bases:
>100_bases AATTATTTGCATTAACTGACTTGATATAAGTTTATCCTTGATCTTTCACACTCTTTCAATCAATTAATATGGATTGAATA CCTTTGTTTTTCCTTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDI DPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQ SDKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG
Sequences:
>Translated_233_residues MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDI DPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQ SDKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG >Mature_232_residues SSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFKLYSHTHFSHIGWRLSRETDID PLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLELKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQS DKDSNRNLICTIGLIIDLHRHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27509; Mature: 27378
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFK CCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LYSHTHFSHIGWRLSRETDIDPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLE HHHCCHHHHHCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH LKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQSDKDSNRNLICTIGLIIDLH HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH RHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSLKLLLAKICPYSDYSLILDNRHFYSWKKPYLSYDSHKGWSLERLNIFQRIVRSLFK CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LYSHTHFSHIGWRLSRETDIDPLFIQNMQKCWETAYPKKICPFFTFTPYLLYDSIKEMLE HHHCCHHHHHCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH LKSVQKVNKAQNNTIQEFIIDHINIGCTTETILQLLKDGQSDKDSNRNLICTIGLIIDLH HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHH RHSYLEADILRVFQGSGYEKRDIQSMFALVKQRCDNQSYDRDYIPPCQNNLTG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA