Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447110

Identifier: 46447110

GI number: 46447110

Start: 1751410

End: 1752378

Strand: Direct

Name: 46447110

Synonym: pc1476

Alternate gene names: NA

Gene position: 1751410-1752378 (Clockwise)

Preceding gene: 46447109

Following gene: 46447111

Centisome position: 72.54

GC content: 34.98

Gene sequence:

>969_bases
ATGATAAAAAAGATTTGTAAATATGCCATCCATCTCGCATTGACAGCTCAATTGGCTTTAACATCAAGTTGCCAAATGAC
AAATTGTGAGATGGATCCTATCATTGTTTACACACCGCCATCTCATCAACTTACAGATCTACCATCACCTTTTCAGCGTC
TTTCTCATGAGGAAGAAAAAAGCGAATGGAGTAAGGAGCTAATCATTGGAGAGGTATTTGCCAAAGAATGGGATTTATAT
CGAGCTATTACAGCCTACAAAAGAGCTTTAATTCTTATCCCAGAAGAATTAGTCGAACGAAAGTTGCAGCTTCATTATGA
TCTATTACTTTGTTACTATCTAGGTCATAAATATCAAGAAGTTGTGAACATTTTTGAGTCAACCGATCTCCTTCAAGTGA
ATTACTTATTTCCCGCTTTCAACAATCTTCTCCTCATTCTTTATGAAAGCTATCAGCAATTAAACCAAGAGGAAAAAGCA
GAATGTATTCATAAAATGATTCAAAAATGTTCAAACGAAACAGCTAAAGATCTGACTCTATTTTCTCTTTTGAAAAAAAA
ACAAATTGACGAAGCTCAATCACTCATTCATCAACATCGAGACTTTAAAAATATACAATCTAGTTTAAATACGTATTCTA
CATACGCCAAATCACCCAAACGAGCCCGTTTTTTAAATGCTGTTTTACCAGGAGCTGGCTACTATTATGTAGGACAAAAA
AAATCAGCTTTAACCTCTTTTATGATTAATGCATTATTTACTTACGCTGCTTATCAATTTTTTCAAAGAGGTTATCCGGC
TGCGGGTATCATTACAGCTAGTATGGAGATGGGGTGGTACTATGGAGGGATCAATGGAGCTGGTCAAGAAGCTCAGGAAT
TTAATAATCGTCTTTATGAAGGGGTCTGTAAAAAAATTTTGATTGACCATCGATTATTTCCAGTTCTTATGTTTCAAACG
AGTTTTTAG

Upstream 100 bases:

>100_bases
AATCTAAATTCAAAAGATCGTGGAATTATGAACTTGATGAAGCAATGGATTTCTTAAACCTTAAATTGACAGATCCAGAT
GAAATTGGTCGTACGGTTCG

Downstream 100 bases:

>100_bases
CGTGAAAAAATATTGTTTTAAATATTTTATGTATAGTTTCATTTTTATTGCCCCTTTGTTGAGCGATCCTTGGGGGAAAG
ATGCGGATTTAATTTCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY
RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA
ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK
KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT
SF

Sequences:

>Translated_322_residues
MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY
RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA
ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK
KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT
SF
>Mature_322_residues
MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEKSEWSKELIIGEVFAKEWDLY
RAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQEVVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKA
ECIHKMIQKCSNETAKDLTLFSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK
KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYEGVCKKILIDHRLFPVLMFQT
SF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37297; Mature: 37297

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHH
SEWSKELIIGEVFAKEWDLYRAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKAECIHKMIQKCSNETAKDLTL
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHH
FSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCH
KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCEEECCCCCCCHHHHHHHHHHHH
GVCKKILIDHRLFPVLMFQTSF
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKKICKYAIHLALTAQLALTSSCQMTNCEMDPIIVYTPPSHQLTDLPSPFQRLSHEEEK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHH
SEWSKELIIGEVFAKEWDLYRAITAYKRALILIPEELVERKLQLHYDLLLCYYLGHKYQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVNIFESTDLLQVNYLFPAFNNLLLILYESYQQLNQEEKAECIHKMIQKCSNETAKDLTL
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHH
FSLLKKKQIDEAQSLIHQHRDFKNIQSSLNTYSTYAKSPKRARFLNAVLPGAGYYYVGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCH
KSALTSFMINALFTYAAYQFFQRGYPAAGIITASMEMGWYYGGINGAGQEAQEFNNRLYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCEEECCCCCCCHHHHHHHHHHHH
GVCKKILIDHRLFPVLMFQTSF
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA