Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446994

Identifier: 46446994

GI number: 46446994

Start: 1623980

End: 1626811

Strand: Direct

Name: 46446994

Synonym: pc1360

Alternate gene names: NA

Gene position: 1623980-1626811 (Clockwise)

Preceding gene: 46446993

Following gene: 46446995

Centisome position: 67.26

GC content: 34.57

Gene sequence:

>2832_bases
ATGACAATTTTGCCTTTTAATTCAGATAACTATGATAGAAATTTTGAGTTATTCTCTTCTCGTGATCCATTGGCAGCTTA
TCAACTAGAAGGGATTTTACAACAAGAGGAATTTACACCTTGTAAAACCACTAAAGGGGAGCCTAATTTATTTAAAAGAA
AATTTGGAATAGATGATTATTTGCATGCGCAAACAGGAGCATTAGAAGAAGCGTCTACCTCAATTTCACCCGAGCTTTTA
GAAAAAGGAGAAATTCTATATATTTATGGATTAGGACTAGGATATTTCTATGAGGTATTACAGCCCTGGCTTTTGCAAAA
TCCCCAAAGACATGTGATCTTTTTAGAAGATAATCTTGAAATCATTTACTATTTTTTATTCACTAACACTGCCTCTTCGT
TACTTCAAAATTCTCAAGTTACTCTTTTTTATTTTCGTAACTATCAATCAGACTATGAAAGCTTCTGTAAACTTAACAGT
GCTTTTATCAATAGACCTATTGAATTTCTGACACTTCCTTACTATGCATTACGTAAAGAAATGGAAGCTTTAGCTTTGTG
CTATGTTATCCTACATGACCATAAGATTTTAGAAGCTTTACACAATGAATATTTATCTGGTCAAAAGGGGTTTTTAACAA
ATTTTTACCAAAATATTTTTCATCTTCCCCAATCTCATTTTGCCACAAATCTTTTTGATCGATTTAAAAATATCCCAGCT
ATCATTTGTGGAGCTGGACCCTCTCTAGAAAAAAACATTCATAAACTCAAAGATCTAGGACAAAATGCATTAATTTTTGC
GGGGGGTTCCTCTTTAAATGTGCTCAACCATGCAGGCATACAACCACATTTTGGTTTAGGATTAGATCCAAACCCTGAAC
AAACCCATCGTTTATTAACTAACCATACTTTTCACATTCCTTTTCTTTATCGTTTACGAATTTCACATGCTGCTTTTCAG
CTCATGCAAGGGCCTAAAATCTATGTTTCAGGATCAACAAATCAACTGGCATCTTGGTTTGAAAAAGAGTTAGATATCGC
AGGACCACAATTAGATGAAGGACACAATGTCGTTAATCTATGCACAGAAATTGCTCATAAGATGGGCTGTAACCCTATTA
TTTATGTTGGAATGGACCTTGCATACACCGAAATACAACCCTATGCAAAAGGTATTTCTACTCATCCCCTCTGGATCGAT
ATCAGCCAACCTTATCAAACAGGTGATCAAAAAGCTGTATTAAGAACTGATATTTTTAATCAGTGGATTAAAACTAAATG
GGAATGGATAGCAGAAGCTAATTGGTTAGGCCAATTTGCAAAACATCACTCTGATATACAAATGATTAACGCGACTGAAG
GCGGCTTAGGTTTTCCTTCAGTTCCTAATCTTTCTCTAGAGGAAGTTTCCAACCTGTATTTGGCTAAAACTTATGATATT
TCAAATTGGGTTCATGCCGAAATCCAAAACCAACCACCCAAAATCACTAAACCCGCTCTTTTAAACTTAATCAATCAACT
CAAAAATAGTTTAGACAGATGTTTAGAAGCTTATCGTTCAACAATAAAAACTAAACAAACGGTTCAAATTTTTGCTTCTT
CGACTACCAATTTTTTTGATACACAAACGATTATAACAGATAGCAGCATCAAAACAGAAATTGGATATCGACACTTCTTA
GATATGTTTGACATGGCTTATCAATATCTCCAAAAATCACATCAGCTGATTCACGCCAAAAAAAGTAATGAGTTTCAAGA
AACCTTAGAACGTTTTTGTTTTTTAGAAGAGGTACTCTCGCAGAACATCCAGTTAATGAACGAAGGAATTCAAAAGTTTA
TTTTTTCTCCTCCCCCGATTGCACTTACTTATCAAAAAAGAGCTTTTTCTCATTCAATGGGGGAAATATACCGATTCGAA
GATGGCCGTTTGGAAATTCAAGATCCTGAATTAGGCATTTGTATTCAAGAAACGTTTCATCCGAATCTAAACACAGATCG
CCTCGCGGCTTTTTTCCCAAATGGTCAATTGCAATATGAAATGTTTTATGATCAGCAATTGCTTCACGGACCTTCTCGTT
TCTATCAAGAAAATGGCCAGTTATTAGCTGAAAGCTGGTTTATCAAAGGAAAACGGGTAGGAAAAACAATTCAATACTTT
AATCAAGGCAATCTTTATAGCGTTGGCCGCTATAAAGAAGGATTACTGCATGGAAAACAAGAGTATTTTTATGCTAATGG
ATCTCCTCACATTGTGACTCACTATTTCAATGGATTATTAAATGGAGAAGTTTTTGTTTATACACAAGATAGCAAAATCA
TTAGAGAATTGCATTACCTAAGCGGAAAACGGCATGGTGTTGAAAAGATGTGGGATCAAACTGGTCAACAAATTTTAGAA
TGTCATTATCAAGAAGGAGTCCCTACTGGCAAAGCGATCCAATGGAACCTCAAAGGAGAAAAAAGGAAAGAAGTGATGAT
TTATCATTTCCCTAATGATTTCGATCTAAAGATTTGGGATGAACAGGGACAATGTATCAAATCCTATGAACGTGGCATCG
AAAATTTCTCTTATATCTACGAACAAACACAAAAAAAAGCCGATAATTTAGAAGAGACACTAAAAAATATACTTCAACAA
ATGGATCCTATTGTTGAACAACATTTAACTCAATCTAAAGATGTCGATTTAAAACTAGCAGAAGATTTTGCCGGACTAAA
AGACGCTTTAAAAGGAATGCAAAATCTCAAAGAATTACTCACAGAAACCATGAAAGAGAATCTCAAACATGCTGAAGAAC
TTAAGAAAAATAAAGAGAAGAAACCTTCATGA

Upstream 100 bases:

>100_bases
AAAATGGCCAACTATTTACAGAAGTGATATATCATCAGAATTTACCTAAACAGGCCAGATGTTGGTTTCCAGACGGAACG
ATTGCAAAGGACGTGATCTT

Downstream 100 bases:

>100_bases
ATGATAAAAGGTTTGAAGATAACTTAGAACGGTTACAAAAAAAAGACGCCAAACTTGCTTATCAACTACTGACAGCACAG
GCAGATGATCTCTTATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 943; Mature: 942

Protein sequence:

>943_residues
MTILPFNSDNYDRNFELFSSRDPLAAYQLEGILQQEEFTPCKTTKGEPNLFKRKFGIDDYLHAQTGALEEASTSISPELL
EKGEILYIYGLGLGYFYEVLQPWLLQNPQRHVIFLEDNLEIIYYFLFTNTASSLLQNSQVTLFYFRNYQSDYESFCKLNS
AFINRPIEFLTLPYYALRKEMEALALCYVILHDHKILEALHNEYLSGQKGFLTNFYQNIFHLPQSHFATNLFDRFKNIPA
IICGAGPSLEKNIHKLKDLGQNALIFAGGSSLNVLNHAGIQPHFGLGLDPNPEQTHRLLTNHTFHIPFLYRLRISHAAFQ
LMQGPKIYVSGSTNQLASWFEKELDIAGPQLDEGHNVVNLCTEIAHKMGCNPIIYVGMDLAYTEIQPYAKGISTHPLWID
ISQPYQTGDQKAVLRTDIFNQWIKTKWEWIAEANWLGQFAKHHSDIQMINATEGGLGFPSVPNLSLEEVSNLYLAKTYDI
SNWVHAEIQNQPPKITKPALLNLINQLKNSLDRCLEAYRSTIKTKQTVQIFASSTTNFFDTQTIITDSSIKTEIGYRHFL
DMFDMAYQYLQKSHQLIHAKKSNEFQETLERFCFLEEVLSQNIQLMNEGIQKFIFSPPPIALTYQKRAFSHSMGEIYRFE
DGRLEIQDPELGICIQETFHPNLNTDRLAAFFPNGQLQYEMFYDQQLLHGPSRFYQENGQLLAESWFIKGKRVGKTIQYF
NQGNLYSVGRYKEGLLHGKQEYFYANGSPHIVTHYFNGLLNGEVFVYTQDSKIIRELHYLSGKRHGVEKMWDQTGQQILE
CHYQEGVPTGKAIQWNLKGEKRKEVMIYHFPNDFDLKIWDEQGQCIKSYERGIENFSYIYEQTQKKADNLEETLKNILQQ
MDPIVEQHLTQSKDVDLKLAEDFAGLKDALKGMQNLKELLTETMKENLKHAEELKKNKEKKPS

Sequences:

>Translated_943_residues
MTILPFNSDNYDRNFELFSSRDPLAAYQLEGILQQEEFTPCKTTKGEPNLFKRKFGIDDYLHAQTGALEEASTSISPELL
EKGEILYIYGLGLGYFYEVLQPWLLQNPQRHVIFLEDNLEIIYYFLFTNTASSLLQNSQVTLFYFRNYQSDYESFCKLNS
AFINRPIEFLTLPYYALRKEMEALALCYVILHDHKILEALHNEYLSGQKGFLTNFYQNIFHLPQSHFATNLFDRFKNIPA
IICGAGPSLEKNIHKLKDLGQNALIFAGGSSLNVLNHAGIQPHFGLGLDPNPEQTHRLLTNHTFHIPFLYRLRISHAAFQ
LMQGPKIYVSGSTNQLASWFEKELDIAGPQLDEGHNVVNLCTEIAHKMGCNPIIYVGMDLAYTEIQPYAKGISTHPLWID
ISQPYQTGDQKAVLRTDIFNQWIKTKWEWIAEANWLGQFAKHHSDIQMINATEGGLGFPSVPNLSLEEVSNLYLAKTYDI
SNWVHAEIQNQPPKITKPALLNLINQLKNSLDRCLEAYRSTIKTKQTVQIFASSTTNFFDTQTIITDSSIKTEIGYRHFL
DMFDMAYQYLQKSHQLIHAKKSNEFQETLERFCFLEEVLSQNIQLMNEGIQKFIFSPPPIALTYQKRAFSHSMGEIYRFE
DGRLEIQDPELGICIQETFHPNLNTDRLAAFFPNGQLQYEMFYDQQLLHGPSRFYQENGQLLAESWFIKGKRVGKTIQYF
NQGNLYSVGRYKEGLLHGKQEYFYANGSPHIVTHYFNGLLNGEVFVYTQDSKIIRELHYLSGKRHGVEKMWDQTGQQILE
CHYQEGVPTGKAIQWNLKGEKRKEVMIYHFPNDFDLKIWDEQGQCIKSYERGIENFSYIYEQTQKKADNLEETLKNILQQ
MDPIVEQHLTQSKDVDLKLAEDFAGLKDALKGMQNLKELLTETMKENLKHAEELKKNKEKKPS
>Mature_942_residues
TILPFNSDNYDRNFELFSSRDPLAAYQLEGILQQEEFTPCKTTKGEPNLFKRKFGIDDYLHAQTGALEEASTSISPELLE
KGEILYIYGLGLGYFYEVLQPWLLQNPQRHVIFLEDNLEIIYYFLFTNTASSLLQNSQVTLFYFRNYQSDYESFCKLNSA
FINRPIEFLTLPYYALRKEMEALALCYVILHDHKILEALHNEYLSGQKGFLTNFYQNIFHLPQSHFATNLFDRFKNIPAI
ICGAGPSLEKNIHKLKDLGQNALIFAGGSSLNVLNHAGIQPHFGLGLDPNPEQTHRLLTNHTFHIPFLYRLRISHAAFQL
MQGPKIYVSGSTNQLASWFEKELDIAGPQLDEGHNVVNLCTEIAHKMGCNPIIYVGMDLAYTEIQPYAKGISTHPLWIDI
SQPYQTGDQKAVLRTDIFNQWIKTKWEWIAEANWLGQFAKHHSDIQMINATEGGLGFPSVPNLSLEEVSNLYLAKTYDIS
NWVHAEIQNQPPKITKPALLNLINQLKNSLDRCLEAYRSTIKTKQTVQIFASSTTNFFDTQTIITDSSIKTEIGYRHFLD
MFDMAYQYLQKSHQLIHAKKSNEFQETLERFCFLEEVLSQNIQLMNEGIQKFIFSPPPIALTYQKRAFSHSMGEIYRFED
GRLEIQDPELGICIQETFHPNLNTDRLAAFFPNGQLQYEMFYDQQLLHGPSRFYQENGQLLAESWFIKGKRVGKTIQYFN
QGNLYSVGRYKEGLLHGKQEYFYANGSPHIVTHYFNGLLNGEVFVYTQDSKIIRELHYLSGKRHGVEKMWDQTGQQILEC
HYQEGVPTGKAIQWNLKGEKRKEVMIYHFPNDFDLKIWDEQGQCIKSYERGIENFSYIYEQTQKKADNLEETLKNILQQM
DPIVEQHLTQSKDVDLKLAEDFAGLKDALKGMQNLKELLTETMKENLKHAEELKKNKEKKPS

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 109159; Mature: 109028

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILPFNSDNYDRNFELFSSRDPLAAYQLEGILQQEEFTPCKTTKGEPNLFKRKFGIDDY
CEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHH
LHAQTGALEEASTSISPELLEKGEILYIYGLGLGYFYEVLQPWLLQNPQRHVIFLEDNLE
HHHCCCCHHHHHCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCE
IIYYFLFTNTASSLLQNSQVTLFYFRNYQSDYESFCKLNSAFINRPIEFLTLPYYALRKE
EEEEEEHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHH
MEALALCYVILHDHKILEALHNEYLSGQKGFLTNFYQNIFHLPQSHFATNLFDRFKNIPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCE
IICGAGPSLEKNIHKLKDLGQNALIFAGGSSLNVLNHAGIQPHFGLGLDPNPEQTHRLLT
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH
NHTFHIPFLYRLRISHAAFQLMQGPKIYVSGSTNQLASWFEKELDIAGPQLDEGHNVVNL
CCEEECCCCEEHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
CTEIAHKMGCNPIIYVGMDLAYTEIQPYAKGISTHPLWIDISQPYQTGDQKAVLRTDIFN
HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
QWIKTKWEWIAEANWLGQFAKHHSDIQMINATEGGLGFPSVPNLSLEEVSNLYLAKTYDI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEEEECC
SNWVHAEIQNQPPKITKPALLNLINQLKNSLDRCLEAYRSTIKTKQTVQIFASSTTNFFD
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCC
TQTIITDSSIKTEIGYRHFLDMFDMAYQYLQKSHQLIHAKKSNEFQETLERFCFLEEVLS
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QNIQLMNEGIQKFIFSPPPIALTYQKRAFSHSMGEIYRFEDGRLEIQDPELGICIQETFH
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCHHCEEEECCCEEEEECCCCCEEEEECCC
PNLNTDRLAAFFPNGQLQYEMFYDQQLLHGPSRFYQENGQLLAESWFIKGKRVGKTIQYF
CCCCCCCEEEECCCCCEEEEEEHHHHHHHCHHHHHHCCCCEEEHHHHHCCHHHHHHHHHH
NQGNLYSVGRYKEGLLHGKQEYFYANGSPHIVTHYFNGLLNGEVFVYTQDSKIIRELHYL
CCCCEEECCCHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHHHH
SGKRHGVEKMWDQTGQQILECHYQEGVPTGKAIQWNLKGEKRKEVMIYHFPNDFDLKIWD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEC
EQGQCIKSYERGIENFSYIYEQTQKKADNLEETLKNILQQMDPIVEQHLTQSKDVDLKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEH
EDFAGLKDALKGMQNLKELLTETMKENLKHAEELKKNKEKKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TILPFNSDNYDRNFELFSSRDPLAAYQLEGILQQEEFTPCKTTKGEPNLFKRKFGIDDY
EEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHH
LHAQTGALEEASTSISPELLEKGEILYIYGLGLGYFYEVLQPWLLQNPQRHVIFLEDNLE
HHHCCCCHHHHHCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCE
IIYYFLFTNTASSLLQNSQVTLFYFRNYQSDYESFCKLNSAFINRPIEFLTLPYYALRKE
EEEEEEHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHH
MEALALCYVILHDHKILEALHNEYLSGQKGFLTNFYQNIFHLPQSHFATNLFDRFKNIPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCE
IICGAGPSLEKNIHKLKDLGQNALIFAGGSSLNVLNHAGIQPHFGLGLDPNPEQTHRLLT
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH
NHTFHIPFLYRLRISHAAFQLMQGPKIYVSGSTNQLASWFEKELDIAGPQLDEGHNVVNL
CCEEECCCCEEHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
CTEIAHKMGCNPIIYVGMDLAYTEIQPYAKGISTHPLWIDISQPYQTGDQKAVLRTDIFN
HHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
QWIKTKWEWIAEANWLGQFAKHHSDIQMINATEGGLGFPSVPNLSLEEVSNLYLAKTYDI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEEEECC
SNWVHAEIQNQPPKITKPALLNLINQLKNSLDRCLEAYRSTIKTKQTVQIFASSTTNFFD
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCC
TQTIITDSSIKTEIGYRHFLDMFDMAYQYLQKSHQLIHAKKSNEFQETLERFCFLEEVLS
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QNIQLMNEGIQKFIFSPPPIALTYQKRAFSHSMGEIYRFEDGRLEIQDPELGICIQETFH
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCHHCEEEECCCEEEEECCCCCEEEEECCC
PNLNTDRLAAFFPNGQLQYEMFYDQQLLHGPSRFYQENGQLLAESWFIKGKRVGKTIQYF
CCCCCCCEEEECCCCCEEEEEEHHHHHHHCHHHHHHCCCCEEEHHHHHCCHHHHHHHHHH
NQGNLYSVGRYKEGLLHGKQEYFYANGSPHIVTHYFNGLLNGEVFVYTQDSKIIRELHYL
CCCCEEECCCHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHHHH
SGKRHGVEKMWDQTGQQILECHYQEGVPTGKAIQWNLKGEKRKEVMIYHFPNDFDLKIWD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEC
EQGQCIKSYERGIENFSYIYEQTQKKADNLEETLKNILQQMDPIVEQHLTQSKDVDLKLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEH
EDFAGLKDALKGMQNLKELLTETMKENLKHAEELKKNKEKKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA