Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446995

Identifier: 46446995

GI number: 46446995

Start: 1626808

End: 1628703

Strand: Direct

Name: 46446995

Synonym: pc1361

Alternate gene names: NA

Gene position: 1626808-1628703 (Clockwise)

Preceding gene: 46446994

Following gene: 46446997

Centisome position: 67.38

GC content: 32.86

Gene sequence:

>1896_bases
ATGAATGATAAAAGGTTTGAAGATAACTTAGAACGGTTACAAAAAAAAGACGCCAAACTTGCTTATCAACTACTGACAGC
ACAGGCAGATGATCTCTTATTTGTAAAAACGAATCAAAATGAAAACAATTTAAAGCGTATATATAAAGGGACTACTTATT
TTTATCACTCTTCACAATCTGCTCAAATAGAAGCTAAAAACTGGTTTGACCATTTAAGCCCTCAACATATTTCCATTTTA
TTCGTTTATGGAATTGGTTTGGGATACTATTACTTAGCAGCATTAGATTGGTTAAAACAAGATGAGAGACGCCGTTTAGT
TTTTTTAGAAGAAGATCCAGGCATTCTTTGTCGTTTGTTTGAAACGGAAATTGGAACAAAGCTTCTCTCTGATGCTCAAG
TTCAAATTGTTTATCTCGAAAATGGTTTTGAAGATAAAACGTTGCTAAATGAGTTATCTTGGAAATATTTAAACGATACT
TTTGCTATTTCAGCTTTGAAACTTTATCTAGAAGTTAATGCAGAAGGCTTTTCTAAACTTAAACATCTTTTATCTTATCA
TCTCAATCAAAAAAAAGCTTTTGTAGAAGAGTATTTACAATATGGAATTGCCTTTTTCCGCAATTTCTATCCTAATTTGC
TCATGCTTCCAAAGTCTTATTTTGGTAATGCCCTTTTTGGACAATTTAAACAAACTCCAGCCATTATTTGTGGAGCCGGT
CCTTCCTTAAATAAAAACTTAGAACAACTAAAAAACCTTAAAGATAGAGCGCTTATTTTTGCTGGTAGTTCTGCTTTAAA
TGCTTTAATTCCCAAAGGAATTATTCCACACTTTGGTGTGGCAGTAGATCCCAATCAAGCACAACTTTCAAGAGTGGCAG
CCGCCAAGCCTCATCAAATTCCTTTTTTTTACCGCCAAAGGTTATTTCATAAAGCTCTTGAGGTAATTTCTGGCCCTAAA
CTTTATCTGTCTGGGACAGGAGGATATGATATTTCAAAATGGTTTGAAGAACAATTAAACTTAAAAGGTGAAGAATTAGA
TGAAGGACACAATGTCGTCAATTTAAGTTTAGAAATTGCTCATGCCTTAGGATGTAATCCGATTATTTTAGTAGGTGTCG
ACCTCGCGTTTACAGACGAAACTTATTATGCCAAAGGGGTCATTGAAGATTTAAAACTGACTGATGATGACTTTAAAACT
GCTAATGACTTTGAATCCGAGCTTCTTTTACGAGAAGACATTAATGGCAAACTCACTCGAACACTTTGGAAATGGATTTC
AGAATCAGAGTGGATTACTGAATTTGCAGAAAAACACCCTGAATTAACTTTAATTAATGCCACAGAAGGGGGAATCGGAT
TTAAAAATATTCTTAATAAAACTTTGCTAGAGGTAACAGAAAAATTTTTAAATCAATCTCAATTTATTGATGAGAAAGTT
GCGATAGAAGTTGTCAAAAATCCGCTTTCTTCTATCACTCAAAATCAAATTCTAGAATTATTAAAGGTTCTACAGGCAAG
TTTAGATCGTTGTATTAGCTTATTTACTCAATTAATCGAAACTAGCAGTCATTTATTAAATCAAATTGAAAATGGTTTTT
CTTCTCCAGAGATCATTCAAACACCCAGAACTTCTCTTTTAGAAACTGACATTGAAGAAGAAATTAGCTATCAATATCTG
TTAGATACTTTTAATCAAGTTTACTTGCGTGTGCACCATCGAACAATTTTAGAATTGCAAGAGCAAAAAAAGGATAGCAA
TATAAAAGAACAATCTCTTCAAAAAATTTCTCTTCAAATCAATCGTCTTACATTTCTTCAAGATGTTGCTAGGGTGAATC
GAGAACTTATTCAACGCTCAATTTCTGAATTTTTAACCTCAAGTCAAATACTCTAA

Upstream 100 bases:

>100_bases
TAAAAGGAATGCAAAATCTCAAAGAATTACTCACAGAAACCATGAAAGAGAATCTCAAACATGCTGAAGAACTTAAGAAA
AATAAAGAGAAGAAACCTTC

Downstream 100 bases:

>100_bases
GCAAGATTTAGCAATCATCCATTCTTCTTGTGTATGAATGACGAAAACTTTGACAGGTGAATCATGCAAACTAATTTCTT
TATCCTGATTCCCCCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MNDKRFEDNLERLQKKDAKLAYQLLTAQADDLLFVKTNQNENNLKRIYKGTTYFYHSSQSAQIEAKNWFDHLSPQHISIL
FVYGIGLGYYYLAALDWLKQDERRRLVFLEEDPGILCRLFETEIGTKLLSDAQVQIVYLENGFEDKTLLNELSWKYLNDT
FAISALKLYLEVNAEGFSKLKHLLSYHLNQKKAFVEEYLQYGIAFFRNFYPNLLMLPKSYFGNALFGQFKQTPAIICGAG
PSLNKNLEQLKNLKDRALIFAGSSALNALIPKGIIPHFGVAVDPNQAQLSRVAAAKPHQIPFFYRQRLFHKALEVISGPK
LYLSGTGGYDISKWFEEQLNLKGEELDEGHNVVNLSLEIAHALGCNPIILVGVDLAFTDETYYAKGVIEDLKLTDDDFKT
ANDFESELLLREDINGKLTRTLWKWISESEWITEFAEKHPELTLINATEGGIGFKNILNKTLLEVTEKFLNQSQFIDEKV
AIEVVKNPLSSITQNQILELLKVLQASLDRCISLFTQLIETSSHLLNQIENGFSSPEIIQTPRTSLLETDIEEEISYQYL
LDTFNQVYLRVHHRTILELQEQKKDSNIKEQSLQKISLQINRLTFLQDVARVNRELIQRSISEFLTSSQIL

Sequences:

>Translated_631_residues
MNDKRFEDNLERLQKKDAKLAYQLLTAQADDLLFVKTNQNENNLKRIYKGTTYFYHSSQSAQIEAKNWFDHLSPQHISIL
FVYGIGLGYYYLAALDWLKQDERRRLVFLEEDPGILCRLFETEIGTKLLSDAQVQIVYLENGFEDKTLLNELSWKYLNDT
FAISALKLYLEVNAEGFSKLKHLLSYHLNQKKAFVEEYLQYGIAFFRNFYPNLLMLPKSYFGNALFGQFKQTPAIICGAG
PSLNKNLEQLKNLKDRALIFAGSSALNALIPKGIIPHFGVAVDPNQAQLSRVAAAKPHQIPFFYRQRLFHKALEVISGPK
LYLSGTGGYDISKWFEEQLNLKGEELDEGHNVVNLSLEIAHALGCNPIILVGVDLAFTDETYYAKGVIEDLKLTDDDFKT
ANDFESELLLREDINGKLTRTLWKWISESEWITEFAEKHPELTLINATEGGIGFKNILNKTLLEVTEKFLNQSQFIDEKV
AIEVVKNPLSSITQNQILELLKVLQASLDRCISLFTQLIETSSHLLNQIENGFSSPEIIQTPRTSLLETDIEEEISYQYL
LDTFNQVYLRVHHRTILELQEQKKDSNIKEQSLQKISLQINRLTFLQDVARVNRELIQRSISEFLTSSQIL
>Mature_631_residues
MNDKRFEDNLERLQKKDAKLAYQLLTAQADDLLFVKTNQNENNLKRIYKGTTYFYHSSQSAQIEAKNWFDHLSPQHISIL
FVYGIGLGYYYLAALDWLKQDERRRLVFLEEDPGILCRLFETEIGTKLLSDAQVQIVYLENGFEDKTLLNELSWKYLNDT
FAISALKLYLEVNAEGFSKLKHLLSYHLNQKKAFVEEYLQYGIAFFRNFYPNLLMLPKSYFGNALFGQFKQTPAIICGAG
PSLNKNLEQLKNLKDRALIFAGSSALNALIPKGIIPHFGVAVDPNQAQLSRVAAAKPHQIPFFYRQRLFHKALEVISGPK
LYLSGTGGYDISKWFEEQLNLKGEELDEGHNVVNLSLEIAHALGCNPIILVGVDLAFTDETYYAKGVIEDLKLTDDDFKT
ANDFESELLLREDINGKLTRTLWKWISESEWITEFAEKHPELTLINATEGGIGFKNILNKTLLEVTEKFLNQSQFIDEKV
AIEVVKNPLSSITQNQILELLKVLQASLDRCISLFTQLIETSSHLLNQIENGFSSPEIIQTPRTSLLETDIEEEISYQYL
LDTFNQVYLRVHHRTILELQEQKKDSNIKEQSLQKISLQINRLTFLQDVARVNRELIQRSISEFLTSSQIL

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72476; Mature: 72476

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKRFEDNLERLQKKDAKLAYQLLTAQADDLLFVKTNQNENNLKRIYKGTTYFYHSSQS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEECCCC
AQIEAKNWFDHLSPQHISILFVYGIGLGYYYLAALDWLKQDERRRLVFLEEDPGILCRLF
CEEEHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHH
ETEIGTKLLSDAQVQIVYLENGFEDKTLLNELSWKYLNDTFAISALKLYLEVNAEGFSKL
HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHH
KHLLSYHLNQKKAFVEEYLQYGIAFFRNFYPNLLMLPKSYFGNALFGQFKQTPAIICGAG
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHCCCCEEEECCC
PSLNKNLEQLKNLKDRALIFAGSSALNALIPKGIIPHFGVAVDPNQAQLSRVAAAKPHQI
CCCCCHHHHHHCCHHCEEEEECCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCC
PFFYRQRLFHKALEVISGPKLYLSGTGGYDISKWFEEQLNLKGEELDEGHNVVNLSLEIA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEH
HALGCNPIILVGVDLAFTDETYYAKGVIEDLKLTDDDFKTANDFESELLLREDINGKLTR
HHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
TLWKWISESEWITEFAEKHPELTLINATEGGIGFKNILNKTLLEVTEKFLNQSQFIDEKV
HHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEVVKNPLSSITQNQILELLKVLQASLDRCISLFTQLIETSSHLLNQIENGFSSPEIIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPRTSLLETDIEEEISYQYLLDTFNQVYLRVHHRTILELQEQKKDSNIKEQSLQKISLQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NRLTFLQDVARVNRELIQRSISEFLTSSQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDKRFEDNLERLQKKDAKLAYQLLTAQADDLLFVKTNQNENNLKRIYKGTTYFYHSSQS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEECCCC
AQIEAKNWFDHLSPQHISILFVYGIGLGYYYLAALDWLKQDERRRLVFLEEDPGILCRLF
CEEEHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEHH
ETEIGTKLLSDAQVQIVYLENGFEDKTLLNELSWKYLNDTFAISALKLYLEVNAEGFSKL
HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHH
KHLLSYHLNQKKAFVEEYLQYGIAFFRNFYPNLLMLPKSYFGNALFGQFKQTPAIICGAG
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHCCCCEEEECCC
PSLNKNLEQLKNLKDRALIFAGSSALNALIPKGIIPHFGVAVDPNQAQLSRVAAAKPHQI
CCCCCHHHHHHCCHHCEEEEECCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCC
PFFYRQRLFHKALEVISGPKLYLSGTGGYDISKWFEEQLNLKGEELDEGHNVVNLSLEIA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEH
HALGCNPIILVGVDLAFTDETYYAKGVIEDLKLTDDDFKTANDFESELLLREDINGKLTR
HHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
TLWKWISESEWITEFAEKHPELTLINATEGGIGFKNILNKTLLEVTEKFLNQSQFIDEKV
HHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIEVVKNPLSSITQNQILELLKVLQASLDRCISLFTQLIETSSHLLNQIENGFSSPEIIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPRTSLLETDIEEEISYQYLLDTFNQVYLRVHHRTILELQEQKKDSNIKEQSLQKISLQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NRLTFLQDVARVNRELIQRSISEFLTSSQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA