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The map label for this gene is 46446836

Identifier: 46446836

GI number: 46446836

Start: 1434125

End: 1434541

Strand: Reverse

Name: 46446836

Synonym: pc1202

Alternate gene names: NA

Gene position: 1434541-1434125 (Counterclockwise)

Preceding gene: 46446837

Following gene: 46446835

Centisome position: 59.41

GC content: 41.49

Gene sequence:

>417_bases
TTGTCTCTACAAATTCACCAGATTGATTGGGAGCGCTGTGAAATCACATTTCCTCAGTCTAAAATGAAGGGAGTGTACAA
AGAGACTGTTATTACCTATTCAAATAGCATTATGGAAAGGCTTCGAGAGCATATTGGCGAGAGAAAAGGACATGTTTTCA
TTACGAGATTTGGAAAGCCTGTGATGATCAATCAAGTCGCTGTGACATTTGCCAAAGCTGGGAAAGAGGCCGGTATTCCG
TTTAAAATCACCCCGCACGTCTTGAGGGCATCTGCTGTCACTTATCTTAAACAGCAGGGATTTCAAGACAGCGATATTAT
GCGTGTAACTGGACATGCTTCCTCGGAGATGGTTTATGCTTACGATAAATCCGCTCGATCAGATAATGCCAGCAAAAAAG
TTAACTTAATACCATAA

Upstream 100 bases:

>100_bases
GCAGTGGATTACTTTTTTTTAAGAGCTGGATAAAATTAATTCACGTGATTGTTTAATCGGGAAAGTGATTTTACAGGGTG
GTAAGCGCGTAAGTGAGGTC

Downstream 100 bases:

>100_bases
AGGTTCTGAATGAGCGCTAAAAAGAACGAGATCTTTGATCCTAAGAGCTACGCTATGTTTTTGGAACACATTGGGAAAGA
TATTAACCTGAACTTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLQIHQIDWERCEITFPQSKMKGVYKETVITYSNSIMERLREHIGERKGHVFITRFGKPVMINQVAVTFAKAGKEAGIP
FKITPHVLRASAVTYLKQQGFQDSDIMRVTGHASSEMVYAYDKSARSDNASKKVNLIP

Sequences:

>Translated_138_residues
MSLQIHQIDWERCEITFPQSKMKGVYKETVITYSNSIMERLREHIGERKGHVFITRFGKPVMINQVAVTFAKAGKEAGIP
FKITPHVLRASAVTYLKQQGFQDSDIMRVTGHASSEMVYAYDKSARSDNASKKVNLIP
>Mature_137_residues
SLQIHQIDWERCEITFPQSKMKGVYKETVITYSNSIMERLREHIGERKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPF
KITPHVLRASAVTYLKQQGFQDSDIMRVTGHASSEMVYAYDKSARSDNASKKVNLIP

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 15662; Mature: 15531

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQIHQIDWERCEITFPQSKMKGVYKETVITYSNSIMERLREHIGERKGHVFITRFGKP
CCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
VMINQVAVTFAKAGKEAGIPFKITPHVLRASAVTYLKQQGFQDSDIMRVTGHASSEMVYA
EEHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE
YDKSARSDNASKKVNLIP
ECCCCCCCCCCCEEECCC
>Mature Secondary Structure 
SLQIHQIDWERCEITFPQSKMKGVYKETVITYSNSIMERLREHIGERKGHVFITRFGKP
CEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
VMINQVAVTFAKAGKEAGIPFKITPHVLRASAVTYLKQQGFQDSDIMRVTGHASSEMVYA
EEHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE
YDKSARSDNASKKVNLIP
ECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202459 [H]