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The map label for this gene is 46446837

Identifier: 46446837

GI number: 46446837

Start: 1434620

End: 1435102

Strand: Reverse

Name: 46446837

Synonym: pc1203

Alternate gene names: NA

Gene position: 1435102-1434620 (Counterclockwise)

Preceding gene: 46446838

Following gene: 46446836

Centisome position: 59.44

GC content: 39.75

Gene sequence:

>483_bases
ATGACCTTGATGCCAACAGTGATTGAACCCTCTATTGGATTTAGCTTAGAGACCTACGAACAGGCAAAAGCATTTCAAAC
AAATGTAATATGGAACAAACTAGATGAGATCACATTGGAAGAGGCGCTGTCCCATTGGCTATCCACTTTGAGTCATAGAA
CGCAAATTAATTATCGATCAGGAATTCGCAAGCTGATTGAATTTGGTCTTCTCAATCCTCTAATGAGCCTTCAAGTATTT
GCCTTAACGAATCATGAAGCTGTGATTGATCGAATCAAGTTGATACAAGACTGGGCTGAGGCAAGTCGGCAATCACGAGC
AGCTTGCTATATCTCTTTTACAGGATTTTTACAACGCCGCCTTCAAGGTATTGTAAAAAAGGCTTTGCCGAACAAAGAAG
GAAGCTCAAAAACTTTTTTTAAAATCGGCGAAAAAGTGAAAACACCAGCAATGACTCAGGCGCAGTGGATTACTTTTTTT
TAA

Upstream 100 bases:

>100_bases
AGAAAAAAGATTAAACAAAGGAGCCAACAATAACACTTAGTGAAGAAGCAATCTCATATTTAGAAGAACACATCATAGAA
AGCAAGGAGTCAAATAAGCT

Downstream 100 bases:

>100_bases
GAGCTGGATAAAATTAATTCACGTGATTGTTTAATCGGGAAAGTGATTTTACAGGGTGGTAAGCGCGTAAGTGAGGTCTT
GTCTCTACAAATTCACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTLMPTVIEPSIGFSLETYEQAKAFQTNVIWNKLDEITLEEALSHWLSTLSHRTQINYRSGIRKLIEFGLLNPLMSLQVF
ALTNHEAVIDRIKLIQDWAEASRQSRAACYISFTGFLQRRLQGIVKKALPNKEGSSKTFFKIGEKVKTPAMTQAQWITFF

Sequences:

>Translated_160_residues
MTLMPTVIEPSIGFSLETYEQAKAFQTNVIWNKLDEITLEEALSHWLSTLSHRTQINYRSGIRKLIEFGLLNPLMSLQVF
ALTNHEAVIDRIKLIQDWAEASRQSRAACYISFTGFLQRRLQGIVKKALPNKEGSSKTFFKIGEKVKTPAMTQAQWITFF
>Mature_159_residues
TLMPTVIEPSIGFSLETYEQAKAFQTNVIWNKLDEITLEEALSHWLSTLSHRTQINYRSGIRKLIEFGLLNPLMSLQVFA
LTNHEAVIDRIKLIQDWAEASRQSRAACYISFTGFLQRRLQGIVKKALPNKEGSSKTFFKIGEKVKTPAMTQAQWITFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 18355; Mature: 18223

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLMPTVIEPSIGFSLETYEQAKAFQTNVIWNKLDEITLEEALSHWLSTLSHRTQINYRS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIRKLIEFGLLNPLMSLQVFALTNHEAVIDRIKLIQDWAEASRQSRAACYISFTGFLQRR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH
LQGIVKKALPNKEGSSKTFFKIGEKVKTPAMTQAQWITFF
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECC
>Mature Secondary Structure 
TLMPTVIEPSIGFSLETYEQAKAFQTNVIWNKLDEITLEEALSHWLSTLSHRTQINYRS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIRKLIEFGLLNPLMSLQVFALTNHEAVIDRIKLIQDWAEASRQSRAACYISFTGFLQRR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH
LQGIVKKALPNKEGSSKTFFKIGEKVKTPAMTQAQWITFF
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202459 [H]