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The map label for this gene is 46446835

Identifier: 46446835

GI number: 46446835

Start: 1433201

End: 1433911

Strand: Reverse

Name: 46446835

Synonym: pc1201

Alternate gene names: NA

Gene position: 1433911-1433201 (Counterclockwise)

Preceding gene: 46446836

Following gene: 46446832

Centisome position: 59.39

GC content: 32.91

Gene sequence:

>711_bases
ATGGATTTAATCAAATTATATTGTAGTGTGGATGATTTTTGGAAGTCTTTTGAGCAGAAATGGAATAAACAGTTAATTGA
TCATGGCAAAACAAAGCGAGGACCTCAACCTGAATTATCGATACCAGAGATGATGACAATTGTCATTTTATTTCATCAAT
CAAATGATCGAACATTTAAGCACTTTTATGGATATGTTACCAAATACTTAGTTAAAGAATTTCCAAACTTAATTAGTTAT
AGCCGCTTTGTTTATTTAAAGAAGAACCTTTTTGCTCCTCTATTTGCTTATCTTTTGGACAAAAGAGGAGAAATCACAGG
AATTGCTTTTATTGATTCTCCATCGATAGATGTTTGCCACAATAAACGTATAAAAAGAAACAAGGTCTTTAAAGGTTTAG
CAAAGAGGGGGAAAACAACTTCAGGGTGGTTTTTCGGGTTTAAATTGCATCTCATGATCAATGAGAGAGGAGAAATTTTG
GCTTTTCAGCTAACTCCTGGAAATGTTGCTGATGTTTCTATTGCCGAAACTTTATCGAAAGGGGTTTTTGGGAAACTATT
TGGTGATAAGGGATATATTTCGAAAGAACTTTCAAAGAGGCTTTTGAAACAAGGTCTTGAATTATTTACTACCCTAAGAT
CGAATAGGAAGCAGAATCTTATGAAGTTGACAGACAAAATTCTTCTTAGAACCTGTTTAAAATCTTTTTAA

Upstream 100 bases:

>100_bases
AATAAATAAGAAGAATAAAATTTAAATGACAAAAGACCTCTGCATCATTTAAAACATTTGTTTCCCCAAACTAATGTTTA
ATATGACATGAGAGGTCAAA

Downstream 100 bases:

>100_bases
AAGGAGAACCACAAACGCCAAAATGACCAGATTTAAGCTTGTATTCAATTTTCTTTCGCAGTTCTTCCATAACCTTCTGC
ATTTTTCTAACCAGCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; IS4 Family Transposase; Transposase And Inactivated Derivative; Protease; Transposase For Insertion Sequence Element; Membrane-Associated Metal-Dependent Hydrolase; Transposase And Inactivated Derivatives IS5 Family; Transposase IS

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDLIKLYCSVDDFWKSFEQKWNKQLIDHGKTKRGPQPELSIPEMMTIVILFHQSNDRTFKHFYGYVTKYLVKEFPNLISY
SRFVYLKKNLFAPLFAYLLDKRGEITGIAFIDSPSIDVCHNKRIKRNKVFKGLAKRGKTTSGWFFGFKLHLMINERGEIL
AFQLTPGNVADVSIAETLSKGVFGKLFGDKGYISKELSKRLLKQGLELFTTLRSNRKQNLMKLTDKILLRTCLKSF

Sequences:

>Translated_236_residues
MDLIKLYCSVDDFWKSFEQKWNKQLIDHGKTKRGPQPELSIPEMMTIVILFHQSNDRTFKHFYGYVTKYLVKEFPNLISY
SRFVYLKKNLFAPLFAYLLDKRGEITGIAFIDSPSIDVCHNKRIKRNKVFKGLAKRGKTTSGWFFGFKLHLMINERGEIL
AFQLTPGNVADVSIAETLSKGVFGKLFGDKGYISKELSKRLLKQGLELFTTLRSNRKQNLMKLTDKILLRTCLKSF
>Mature_236_residues
MDLIKLYCSVDDFWKSFEQKWNKQLIDHGKTKRGPQPELSIPEMMTIVILFHQSNDRTFKHFYGYVTKYLVKEFPNLISY
SRFVYLKKNLFAPLFAYLLDKRGEITGIAFIDSPSIDVCHNKRIKRNKVFKGLAKRGKTTSGWFFGFKLHLMINERGEIL
AFQLTPGNVADVSIAETLSKGVFGKLFGDKGYISKELSKRLLKQGLELFTTLRSNRKQNLMKLTDKILLRTCLKSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27424; Mature: 27424

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIKLYCSVDDFWKSFEQKWNKQLIDHGKTKRGPQPELSIPEMMTIVILFHQSNDRTFK
CCHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEECCCCCHHH
HFYGYVTKYLVKEFPNLISYSRFVYLKKNLFAPLFAYLLDKRGEITGIAFIDSPSIDVCH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH
NKRIKRNKVFKGLAKRGKTTSGWFFGFKLHLMINERGEILAFQLTPGNVADVSIAETLSK
CCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHH
GVFGKLFGDKGYISKELSKRLLKQGLELFTTLRSNRKQNLMKLTDKILLRTCLKSF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDLIKLYCSVDDFWKSFEQKWNKQLIDHGKTKRGPQPELSIPEMMTIVILFHQSNDRTFK
CCHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEECCCCCHHH
HFYGYVTKYLVKEFPNLISYSRFVYLKKNLFAPLFAYLLDKRGEITGIAFIDSPSIDVCH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH
NKRIKRNKVFKGLAKRGKTTSGWFFGFKLHLMINERGEILAFQLTPGNVADVSIAETLSK
CCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHH
GVFGKLFGDKGYISKELSKRLLKQGLELFTTLRSNRKQNLMKLTDKILLRTCLKSF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA