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The map label for this gene is cyoA [H]

Identifier: 46446823

GI number: 46446823

Start: 1417628

End: 1418515

Strand: Direct

Name: cyoA [H]

Synonym: pc1189

Alternate gene names: 46446823

Gene position: 1417628-1418515 (Clockwise)

Preceding gene: 46446821

Following gene: 46446824

Centisome position: 58.71

GC content: 33.67

Gene sequence:

>888_bases
ATGAAAGCAGCTAGAAAATCTGTCTTTTACATGCTATTTTTTACCGGCTTAATCTTGTTTTTGATTTTGATTATGCAGGT
TTTAGAGATTTTACATTTCAAAGAATTTATCGCGATTTTATTTCCAGAAGGGTGGGTTGCTGTCAAAGAACGAAATCTTC
TTTTGATAATTCAAGCCTTAATGCTTTTGGTGGTTATTCCTGTCTACATTTTGACATTTGTTTTTTCATGGAAATATAGT
GCGGATAACCCCAAAGGAAAATATGATCCAGATCTAGTTGATAACAAATTTGCAGAATTTATTTGGTGGGGCATTCCCTT
AGTCTTAATAATATTTCTGAGCGTCTTAACATGGGTAAAAACAGCTGAACTCGATCCTTATAAGCCCATTATCTCAGATA
AAAAAGAAATCACTATTCAAGTCATCGCTTTGCAATGGAAATGGCTGTTTATCTATCCTGAAGAAAAAATTGCTACTATT
AATTTTCTACAAATCCCTCAAGACACCCCAATTCATTTTGAAATTACTGCCGATGCCCCCATGAATTCATTTTGGATCCC
TGAACTTGGAGGACAAATTTATGCAATGCCGAGTATGCAGACCGAGCTTTACTTAATTGCCAATCACACAGGAGATTATC
GAGGATCTTCTGCAAATTTAAGTGGAGAAGGATTTTCAGGAATGAATTTCATTACAAGATCTTCAACAGAAGAAGAGTAT
CAACAATGGTTAACTTCTGCGAAGCAATCGAACAATATTCTAAATCAAAACGAATATAATCTAATCGCAAAACCCAGTAA
AAACAATCCAGTAGAAATTTATCGATTAGAAGAAAATTCTCTTTTTGATCTAACAATTGATAAATACATGTACCCTCAAA
AGAAATAA

Upstream 100 bases:

>100_bases
GTCGCTTAAACCAGATAATTAATTCTTATAGGCAAATGATTTAGATATTGAATGGAAATTCTCCATAAATCTCGCCCTAA
TTAAAGGAATAAACTTAAAG

Downstream 100 bases:

>100_bases
TTAAAATATGTTTGGTAAACTTACTTTAGAATCTTTTAAACATGAATCCAGTCAAAATTTTGCTGTAGTGATGATGCTTA
TTAGCGGTATCGCTTTGATT

Product: cytochrome o ubiquinol oxidase chain II cyoA

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKAARKSVFYMLFFTGLILFLILIMQVLEILHFKEFIAILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYS
ADNPKGKYDPDLVDNKFAEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKIATI
NFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSSANLSGEGFSGMNFITRSSTEEEY
QQWLTSAKQSNNILNQNEYNLIAKPSKNNPVEIYRLEENSLFDLTIDKYMYPQKK

Sequences:

>Translated_295_residues
MKAARKSVFYMLFFTGLILFLILIMQVLEILHFKEFIAILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYS
ADNPKGKYDPDLVDNKFAEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKIATI
NFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSSANLSGEGFSGMNFITRSSTEEEY
QQWLTSAKQSNNILNQNEYNLIAKPSKNNPVEIYRLEENSLFDLTIDKYMYPQKK
>Mature_295_residues
MKAARKSVFYMLFFTGLILFLILIMQVLEILHFKEFIAILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYS
ADNPKGKYDPDLVDNKFAEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKIATI
NFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSSANLSGEGFSGMNFITRSSTEEEY
QQWLTSAKQSNNILNQNEYNLIAKPSKNNPVEIYRLEENSLFDLTIDKYMYPQKK

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=259, Percent_Identity=44.4015444015444, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34306; Mature: 34306

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAARKSVFYMLFFTGLILFLILIMQVLEILHFKEFIAILFPEGWVAVKERNLLLIIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
MLLVVIPVYILTFVFSWKYSADNPKGKYDPDLVDNKFAEFIWWGIPLVLIIFLSVLTWVK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKIATINFLQIPQDTPIHFEITADAP
HCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCC
MNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSSANLSGEGFSGMNFITRSSTEEEY
CCCEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
QQWLTSAKQSNNILNQNEYNLIAKPSKNNPVEIYRLEENSLFDLTIDKYMYPQKK
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEHHCCCCCCC
>Mature Secondary Structure
MKAARKSVFYMLFFTGLILFLILIMQVLEILHFKEFIAILFPEGWVAVKERNLLLIIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
MLLVVIPVYILTFVFSWKYSADNPKGKYDPDLVDNKFAEFIWWGIPLVLIIFLSVLTWVK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKIATINFLQIPQDTPIHFEITADAP
HCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCC
MNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSSANLSGEGFSGMNFITRSSTEEEY
CCCEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
QQWLTSAKQSNNILNQNEYNLIAKPSKNNPVEIYRLEENSLFDLTIDKYMYPQKK
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]