| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446821
Identifier: 46446821
GI number: 46446821
Start: 1416324
End: 1416743
Strand: Direct
Name: 46446821
Synonym: pc1187
Alternate gene names: NA
Gene position: 1416324-1416743 (Clockwise)
Preceding gene: 46446820
Following gene: 46446823
Centisome position: 58.66
GC content: 38.81
Gene sequence:
>420_bases ATGAGTATGCAATCTATCTATCATTCAACGTCAAACACTATTTCTAATTATGCTAGCCACATACCAGAAAATACTGCTAA AGCGGCTGTTATTTCGGGAGCTTTCAATTTTGCAGTTGGTTTCTTAATCCTCAACAATGAAAAAGCATCCTCTTTACGTG GTGCTATTGCAATCACTGCTACCTTGATTCATGGAGCGATTAGTCCTCTATTTCAAAAATTTGGAAATAATCGGCAGGAG CTAAGTTTTGTAGGAGAAGCTTTGAGAACTAGCATTTCCTATGCAGGAAGTTTTGCCCTCGCAGCTTCTTTGGGTTACCG CTTCCCTCTAAAAAGTATATCTCTAGTCGTTGCTGCTAATCTCTTCCCAAAACTTTTTGCATCTAGCAGAACTGATTATG CACATTCCCTGTTTGTTTAA
Upstream 100 bases:
>100_bases ATTTGCTGATGATAAAAAATAAGTATTTAATTTTAAATTTATCATCTATTAATGCAGTCCTTTTATCAGAGAGTTTAACA CAAAAAAAAGGAAAATTTTT
Downstream 100 bases:
>100_bases TTTTTAAAATAAGAGGGGGAATAATTATCCCTTCTCTTTTTCGATTGATCTTTCCTTTATTTGTCCTATTCATCCTATTT AATCGCCCTATTTCCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSMQSIYHSTSNTISNYASHIPENTAKAAVISGAFNFAVGFLILNNEKASSLRGAIAITATLIHGAISPLFQKFGNNRQE LSFVGEALRTSISYAGSFALAASLGYRFPLKSISLVVAANLFPKLFASSRTDYAHSLFV
Sequences:
>Translated_139_residues MSMQSIYHSTSNTISNYASHIPENTAKAAVISGAFNFAVGFLILNNEKASSLRGAIAITATLIHGAISPLFQKFGNNRQE LSFVGEALRTSISYAGSFALAASLGYRFPLKSISLVVAANLFPKLFASSRTDYAHSLFV >Mature_138_residues SMQSIYHSTSNTISNYASHIPENTAKAAVISGAFNFAVGFLILNNEKASSLRGAIAITATLIHGAISPLFQKFGNNRQEL SFVGEALRTSISYAGSFALAASLGYRFPLKSISLVVAANLFPKLFASSRTDYAHSLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14868; Mature: 14737
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMQSIYHSTSNTISNYASHIPENTAKAAVISGAFNFAVGFLILNNEKASSLRGAIAITA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH TLIHGAISPLFQKFGNNRQELSFVGEALRTSISYAGSFALAASLGYRFPLKSISLVVAAN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LFPKLFASSRTDYAHSLFV HHHHHHHCCCCCCHHHCCC >Mature Secondary Structure SMQSIYHSTSNTISNYASHIPENTAKAAVISGAFNFAVGFLILNNEKASSLRGAIAITA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH TLIHGAISPLFQKFGNNRQELSFVGEALRTSISYAGSFALAASLGYRFPLKSISLVVAAN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LFPKLFASSRTDYAHSLFV HHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA