| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446757
Identifier: 46446757
GI number: 46446757
Start: 1347076
End: 1347984
Strand: Reverse
Name: 46446757
Synonym: pc1123
Alternate gene names: NA
Gene position: 1347984-1347076 (Counterclockwise)
Preceding gene: 46446759
Following gene: 46446753
Centisome position: 55.83
GC content: 32.12
Gene sequence:
>909_bases ATGCATATATTTAAATTAATAAATTTAAATTTTATGTTTAATAATATAAAGCGTAAATATTCAAAATTAAAATTAATATT TATATTTATTTTGTGTGCCTTTCAAAAAATTGAAGGGATCAAGGCACAAAAAAGTTTAGCTATATGTACTCTCTTTCAAA ATGAATCTAAATATCTTCCTGAATGGATCGAGTTTCACGAAAACCAAGGAGTATCTCATTTTTTCCTTTACAATCATTTC TGTACTGAAGATTGGCAAGACATCCTTAAAAAATACATAGATAGGGGCTTAGTCGAAGTTATTAATTGGCCTTATGAATA TGCCACCGCAGCTGATTGGACACGCATTCAATGCCGAGCCTATATGGATGCAGCACTTAGATCGAAAGGAAGATATCAAT GGTGTGCTTTTCTCGATAGTGATGAATTTCTTTTTTCAGTCGAAGGATTATCTTTGTGTGAAGTATTAAAAGAATATAAA TATGCTCCTGGTGTAGTGGTTAATTGGGTTATGTACGGAACCTCCCACGTTGAAAAAATTTCTGAAAGCGAAAAAATGCT CGACCTTTTAATTTGGAGAGCTCCTCTTGATTTTCCAGCAAACCTTCATTTTAAAACGATCGCAAAACCAGAAGAAATTA AAAATTGTTTTAATCCTCATGGGTTTATATTTCATAATGAAAAAAATGCTGTCGACGAAAATCACCAGCCAAAAGCATTT TCTGATTGGAATTCTTTTTCGGTCAATAAGCTTCGCATTAATCATTACTGGTCTCGTGATAAGGAATTTTTTTATCAAGT AAAAATTGCCCGAAGATTTAAGTTTTTTGAGGGAGGGGAAGAGCCAATTGCTTTTGAAGCAGCTATGAATGTTGAATATG ATCCTATTTTATCATCAAAAAAAGATTAG
Upstream 100 bases:
>100_bases TGAATATTTATCAAATAAGCGACTAAATTAAAAAAGTCAAACCTTATTGCACCATTAAATAATTAAAATAAAAAATTAAT ATTTTTTTTATCTCAATGAG
Downstream 100 bases:
>100_bases ACTATAGATTAAAAAAATGTGAATAGCTTTTCGAATTAATCATCCAGATTGCTGTTCCAAAATCGCGGGATTTCGGACAA AATGGCTAAATTGTTTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD
Sequences:
>Translated_302_residues MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD >Mature_302_residues MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35929; Mature: 35929
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLP CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCC EWIEFHENQGVSHFFLYNHFCTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRA HHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHHCHHHHHHCCCHHHHCCCCCHHHHHHH YMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYKYAPGVVVNWVMYGTSHVEKI HHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHH SESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSK CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC KD CC >Mature Secondary Structure MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLP CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCC EWIEFHENQGVSHFFLYNHFCTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRA HHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHHCHHHHHHCCCHHHHCCCCCHHHHHHH YMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYKYAPGVVVNWVMYGTSHVEKI HHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHH SESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSK CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA