Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446757

Identifier: 46446757

GI number: 46446757

Start: 1347076

End: 1347984

Strand: Reverse

Name: 46446757

Synonym: pc1123

Alternate gene names: NA

Gene position: 1347984-1347076 (Counterclockwise)

Preceding gene: 46446759

Following gene: 46446753

Centisome position: 55.83

GC content: 32.12

Gene sequence:

>909_bases
ATGCATATATTTAAATTAATAAATTTAAATTTTATGTTTAATAATATAAAGCGTAAATATTCAAAATTAAAATTAATATT
TATATTTATTTTGTGTGCCTTTCAAAAAATTGAAGGGATCAAGGCACAAAAAAGTTTAGCTATATGTACTCTCTTTCAAA
ATGAATCTAAATATCTTCCTGAATGGATCGAGTTTCACGAAAACCAAGGAGTATCTCATTTTTTCCTTTACAATCATTTC
TGTACTGAAGATTGGCAAGACATCCTTAAAAAATACATAGATAGGGGCTTAGTCGAAGTTATTAATTGGCCTTATGAATA
TGCCACCGCAGCTGATTGGACACGCATTCAATGCCGAGCCTATATGGATGCAGCACTTAGATCGAAAGGAAGATATCAAT
GGTGTGCTTTTCTCGATAGTGATGAATTTCTTTTTTCAGTCGAAGGATTATCTTTGTGTGAAGTATTAAAAGAATATAAA
TATGCTCCTGGTGTAGTGGTTAATTGGGTTATGTACGGAACCTCCCACGTTGAAAAAATTTCTGAAAGCGAAAAAATGCT
CGACCTTTTAATTTGGAGAGCTCCTCTTGATTTTCCAGCAAACCTTCATTTTAAAACGATCGCAAAACCAGAAGAAATTA
AAAATTGTTTTAATCCTCATGGGTTTATATTTCATAATGAAAAAAATGCTGTCGACGAAAATCACCAGCCAAAAGCATTT
TCTGATTGGAATTCTTTTTCGGTCAATAAGCTTCGCATTAATCATTACTGGTCTCGTGATAAGGAATTTTTTTATCAAGT
AAAAATTGCCCGAAGATTTAAGTTTTTTGAGGGAGGGGAAGAGCCAATTGCTTTTGAAGCAGCTATGAATGTTGAATATG
ATCCTATTTTATCATCAAAAAAAGATTAG

Upstream 100 bases:

>100_bases
TGAATATTTATCAAATAAGCGACTAAATTAAAAAAGTCAAACCTTATTGCACCATTAAATAATTAAAATAAAAAATTAAT
ATTTTTTTTATCTCAATGAG

Downstream 100 bases:

>100_bases
ACTATAGATTAAAAAAATGTGAATAGCTTTTCGAATTAATCATCCAGATTGCTGTTCCAAAATCGCGGGATTTCGGACAA
AATGGCTAAATTGTTTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF
CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK
YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF
SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD

Sequences:

>Translated_302_residues
MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF
CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK
YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF
SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD
>Mature_302_residues
MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLPEWIEFHENQGVSHFFLYNHF
CTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRAYMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYK
YAPGVVVNWVMYGTSHVEKISESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF
SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSKKD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35929; Mature: 35929

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLP
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCC
EWIEFHENQGVSHFFLYNHFCTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRA
HHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHHCHHHHHHCCCHHHHCCCCCHHHHHHH
YMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYKYAPGVVVNWVMYGTSHVEKI
HHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHH
SESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSK
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KD
CC
>Mature Secondary Structure
MHIFKLINLNFMFNNIKRKYSKLKLIFIFILCAFQKIEGIKAQKSLAICTLFQNESKYLP
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCC
EWIEFHENQGVSHFFLYNHFCTEDWQDILKKYIDRGLVEVINWPYEYATAADWTRIQCRA
HHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHHCHHHHHHCCCHHHHCCCCCHHHHHHH
YMDAALRSKGRYQWCAFLDSDEFLFSVEGLSLCEVLKEYKYAPGVVVNWVMYGTSHVEKI
HHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHH
SESEKMLDLLIWRAPLDFPANLHFKTIAKPEEIKNCFNPHGFIFHNEKNAVDENHQPKAF
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
SDWNSFSVNKLRINHYWSRDKEFFYQVKIARRFKFFEGGEEPIAFEAAMNVEYDPILSSK
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA