Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446753

Identifier: 46446753

GI number: 46446753

Start: 1343063

End: 1344028

Strand: Reverse

Name: 46446753

Synonym: pc1119

Alternate gene names: NA

Gene position: 1344028-1343063 (Counterclockwise)

Preceding gene: 46446757

Following gene: 46446752

Centisome position: 55.67

GC content: 31.78

Gene sequence:

>966_bases
TTGAAAGATTTAAATTGCTTAAGTCAGTCAATGAAGGTTTTTGAGATTAATTTGTTGAAACAAATAAAAGAGTTTCTTTA
TGTTAATCAGTTTAGTAAAACTCTAATGGCGTATATGAATTACTTTTTAAGTATTATTTTTCTATTTTTTATAAATACTT
GTGAAGGTTATATTTACGATCTTTCTGTCTGCGCTATTTTCAAAAACGAAGCCCCTTATTTAAGAGAATGGATAGAATAT
CATCGTTTAATAGGTGTGAAGCATTTTTATTTATATAATCATGACAGTACAGACCACTATGATTGCATTTTAGAGCCTTA
TATTCAGTTAGGGATAGTTGAGCTTGAAAATGCCATTAATTATCCTGATTTTAATGGAACACAAGTTGATTGTTATAATA
GATGTTTGATTAAAAGCAGAGGAGTTTCTACATGGGTTGCTTTTATTGATATCGATGAATTCATTTTACCAGCTTTAAAT
GTAGATTTAGCTTGGCTTCTTTCTCATTATATAAATTATGCAGGAGTCGCTTTAAATTGGCGCTGTTTTGGAACGTCTCA
AATTGCTAATTTAAAGGAAGATGAGCTTATGATTAGTCAATTAGTCATGTGTTCGCTCCCTGACTATTCTGCAAATGTTC
ATGTCAAAAGTATCGTGCGCCCAGAGTTGGTCGTGCAGTTTTGTTGTCCGCATAATCCAGTTTATGTACCAGGTTATTAT
GCTGTAGATGTAGATAAGTTTCCTCAAGAAGGTCCTTTAAGTCAAACTGTTAAGCTTAACCAAATTAGAATTAACCATTA
CTGGACTCGTGATGAACATTTTTTTACTCAATATAAAAAACCTCGACGGTTGGCCTGGGGTGATTCAGAGGCTCAAATTT
ACTTATTTTTAAAAGATTTAAACGTTGATCGCGACGAGACTATTTTAAGGTATATTTCAAGATTGAAAATAGCAATAGAA
AAGTAA

Upstream 100 bases:

>100_bases
ACTTAGATGGATGATCCAGAGTAATAAGCGTTTTTAATGCCTATTATATAGATTGTCTATTTTGATACCATAATTACTCT
TCCTCTGTAAAGAAGATGGA

Downstream 100 bases:

>100_bases
TTTTTTTAATCCCTACCTCACCTCACCCTCACAAAATTGATAATGATTGCTAGCAGTACAGATTCTTTAATATATAGGCC
TACTCAAAAGTTTCTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKDLNCLSQSMKVFEINLLKQIKEFLYVNQFSKTLMAYMNYFLSIIFLFFINTCEGYIYDLSVCAIFKNEAPYLREWIEY
HRLIGVKHFYLYNHDSTDHYDCILEPYIQLGIVELENAINYPDFNGTQVDCYNRCLIKSRGVSTWVAFIDIDEFILPALN
VDLAWLLSHYINYAGVALNWRCFGTSQIANLKEDELMISQLVMCSLPDYSANVHVKSIVRPELVVQFCCPHNPVYVPGYY
AVDVDKFPQEGPLSQTVKLNQIRINHYWTRDEHFFTQYKKPRRLAWGDSEAQIYLFLKDLNVDRDETILRYISRLKIAIE
K

Sequences:

>Translated_321_residues
MKDLNCLSQSMKVFEINLLKQIKEFLYVNQFSKTLMAYMNYFLSIIFLFFINTCEGYIYDLSVCAIFKNEAPYLREWIEY
HRLIGVKHFYLYNHDSTDHYDCILEPYIQLGIVELENAINYPDFNGTQVDCYNRCLIKSRGVSTWVAFIDIDEFILPALN
VDLAWLLSHYINYAGVALNWRCFGTSQIANLKEDELMISQLVMCSLPDYSANVHVKSIVRPELVVQFCCPHNPVYVPGYY
AVDVDKFPQEGPLSQTVKLNQIRINHYWTRDEHFFTQYKKPRRLAWGDSEAQIYLFLKDLNVDRDETILRYISRLKIAIE
K
>Mature_321_residues
MKDLNCLSQSMKVFEINLLKQIKEFLYVNQFSKTLMAYMNYFLSIIFLFFINTCEGYIYDLSVCAIFKNEAPYLREWIEY
HRLIGVKHFYLYNHDSTDHYDCILEPYIQLGIVELENAINYPDFNGTQVDCYNRCLIKSRGVSTWVAFIDIDEFILPALN
VDLAWLLSHYINYAGVALNWRCFGTSQIANLKEDELMISQLVMCSLPDYSANVHVKSIVRPELVVQFCCPHNPVYVPGYY
AVDVDKFPQEGPLSQTVKLNQIRINHYWTRDEHFFTQYKKPRRLAWGDSEAQIYLFLKDLNVDRDETILRYISRLKIAIE
K

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37862; Mature: 37862

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLNCLSQSMKVFEINLLKQIKEFLYVNQFSKTLMAYMNYFLSIIFLFFINTCEGYIYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LSVCAIFKNEAPYLREWIEYHRLIGVKHFYLYNHDSTDHYDCILEPYIQLGIVELENAIN
EEEEEEECCCCHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
YPDFNGTQVDCYNRCLIKSRGVSTWVAFIDIDEFILPALNVDLAWLLSHYINYAGVALNW
CCCCCCCEEHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCEEEEE
RCFGTSQIANLKEDELMISQLVMCSLPDYSANVHVKSIVRPELVVQFCCPHNPVYVPGYY
EEECCHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHEECCCCCEEECCEE
AVDVDKFPQEGPLSQTVKLNQIRINHYWTRDEHFFTQYKKPRRLAWGDSEAQIYLFLKDL
EEECCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEEEC
NVDRDETILRYISRLKIAIEK
CCCHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKDLNCLSQSMKVFEINLLKQIKEFLYVNQFSKTLMAYMNYFLSIIFLFFINTCEGYIYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LSVCAIFKNEAPYLREWIEYHRLIGVKHFYLYNHDSTDHYDCILEPYIQLGIVELENAIN
EEEEEEECCCCHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
YPDFNGTQVDCYNRCLIKSRGVSTWVAFIDIDEFILPALNVDLAWLLSHYINYAGVALNW
CCCCCCCEEHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCEEEEE
RCFGTSQIANLKEDELMISQLVMCSLPDYSANVHVKSIVRPELVVQFCCPHNPVYVPGYY
EEECCHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHEECCCCCEEECCEE
AVDVDKFPQEGPLSQTVKLNQIRINHYWTRDEHFFTQYKKPRRLAWGDSEAQIYLFLKDL
EEECCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEEEC
NVDRDETILRYISRLKIAIEK
CCCHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA