Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446704

Identifier: 46446704

GI number: 46446704

Start: 1276945

End: 1278039

Strand: Reverse

Name: 46446704

Synonym: pc1070

Alternate gene names: NA

Gene position: 1278039-1276945 (Counterclockwise)

Preceding gene: 46446705

Following gene: 46446703

Centisome position: 52.93

GC content: 34.52

Gene sequence:

>1095_bases
ATGAAAACCTATTTCATCTATCCAACCAAATCATTAACATTTTTATTATTTTGGATAAGTCTATTTCTTAATCAATATTT
GAGTGCTTCAACATCTGCAATTGAGGGAAAGCACCCTTTATTAGACTCCAAATTCTACCTTGAGCAAGAAGAGCCTTTTA
TTTTAACGATTAATGCTGATATCCCTTCTTTTGTAAAAGTGGGCCAAGTAATTGAGTATACATTTATTGTATCTACGACA
TCATCAACACAAACGTATACAAATGTCACTGTAAGTTGTCCATTGTTGGAAGGAGACATTCTTCTTGACCAAACAACAGT
CAAAATAGATCAACCCGCAACAGGAATGGGCGAATACGTCGTGACACAATATGATATTGATCTAAAAGAAATTGTTTGTG
GTGCAATAGCAGGGGGGGACATAAGTAATGATAATACAGCGGTTGCAAACTCTTCAATCACTTTGCCATTTCTTCCTCTT
AATTTGACAAAGAAAGCTAACCCTACGCTATTTTCTGCAGTTGGTGAGCTAATCACTTATACTTATCAAGTAACTAATTT
AGGAGATGAAGAGATTGAATCTATAAAAATTGAGGATAATAAAATTCCCTTTGTCAGTCTTCCTAGCACGACATTATTCC
CTAATCAATCGTTGACAACTACAGCCTCTTATGTAGTCACTGAAAGTGATATTTTGCAAGGAAGTATTACGAACACAGCC
ATTGCCCAGGGAATTAATTTGAACTTAAATTTGGTCAATTCTAATGAAGTATCAGCAACTGTGACGGTCAATCAAAACCA
AGCAATTTTACCGCCAAGAAGTTTACATGGTTATCGAACTTCTAATCGATTTGTTAATCAAACGGATTATATTGACGTGT
TACAATGGAAACTTCCTTTAAGTGGCGAAAGTCCTATTGGATATAAAATTTTTTCTGACGAAAATCTGAAAAAATTGGTC
GCGAAAATTCCTTATAATACCACTGAGTATTATATTCATAATCGCCGTAAACAGAGTTCTTATACCTATTATATTGTTTC
CGTCGATCAGTTTGGAAGGGTGTCGTTACCTATTTCAGTAAAGATAAAACCTTAA

Upstream 100 bases:

>100_bases
AAAAAATAATTAAACGAAGAAATTAAAGGTGAAATTTGATATGGGTTTTCAAAAGTTCGTATGTTTTGCTAAGTTAAAAC
ATCTATATCAAAGGTGAACA

Downstream 100 bases:

>100_bases
AATTAGTTGATTGATGCCTAAATTAATTGGTAAAACATAAAAAATATGTCGTTAGGTAGAATTAGGAATTTTTTTCCTCG
TTGAAATTCAGTATTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT
SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL
NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA
IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV
AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP

Sequences:

>Translated_364_residues
MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT
SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL
NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA
IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV
AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP
>Mature_364_residues
MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT
SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL
NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA
IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV
AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40492; Mature: 40492

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINAD
CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC
IPSFVKVGQVIEYTFIVSTTSSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYV
CCHHHHHCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEE
VTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPLNLTKKANPTLFSAVGELITY
EEEECCCHHHHHHHEECCCCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHEE
TYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA
EEEEECCCHHHHEEEEEECCCCCEEECCCCEECCCCCCCEEEEEEEEECHHHCCCCCCHH
IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPL
HHCCCEEEEEEEECCCEEEEEEECCCCEECCCHHCCCEECCCCCCCCCCCEEEEEEEECC
SGESPIGYKIFSDENLKKLVAKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISV
CCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECEEEE
KIKP
EECC
>Mature Secondary Structure
MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINAD
CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC
IPSFVKVGQVIEYTFIVSTTSSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYV
CCHHHHHCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEE
VTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPLNLTKKANPTLFSAVGELITY
EEEECCCHHHHHHHEECCCCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHEE
TYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA
EEEEECCCHHHHEEEEEECCCCCEEECCCCEECCCCCCCEEEEEEEEECHHHCCCCCCHH
IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPL
HHCCCEEEEEEEECCCEEEEEEECCCCEECCCHHCCCEECCCCCCCCCCCEEEEEEEECC
SGESPIGYKIFSDENLKKLVAKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISV
CCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECEEEE
KIKP
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA