| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446704
Identifier: 46446704
GI number: 46446704
Start: 1276945
End: 1278039
Strand: Reverse
Name: 46446704
Synonym: pc1070
Alternate gene names: NA
Gene position: 1278039-1276945 (Counterclockwise)
Preceding gene: 46446705
Following gene: 46446703
Centisome position: 52.93
GC content: 34.52
Gene sequence:
>1095_bases ATGAAAACCTATTTCATCTATCCAACCAAATCATTAACATTTTTATTATTTTGGATAAGTCTATTTCTTAATCAATATTT GAGTGCTTCAACATCTGCAATTGAGGGAAAGCACCCTTTATTAGACTCCAAATTCTACCTTGAGCAAGAAGAGCCTTTTA TTTTAACGATTAATGCTGATATCCCTTCTTTTGTAAAAGTGGGCCAAGTAATTGAGTATACATTTATTGTATCTACGACA TCATCAACACAAACGTATACAAATGTCACTGTAAGTTGTCCATTGTTGGAAGGAGACATTCTTCTTGACCAAACAACAGT CAAAATAGATCAACCCGCAACAGGAATGGGCGAATACGTCGTGACACAATATGATATTGATCTAAAAGAAATTGTTTGTG GTGCAATAGCAGGGGGGGACATAAGTAATGATAATACAGCGGTTGCAAACTCTTCAATCACTTTGCCATTTCTTCCTCTT AATTTGACAAAGAAAGCTAACCCTACGCTATTTTCTGCAGTTGGTGAGCTAATCACTTATACTTATCAAGTAACTAATTT AGGAGATGAAGAGATTGAATCTATAAAAATTGAGGATAATAAAATTCCCTTTGTCAGTCTTCCTAGCACGACATTATTCC CTAATCAATCGTTGACAACTACAGCCTCTTATGTAGTCACTGAAAGTGATATTTTGCAAGGAAGTATTACGAACACAGCC ATTGCCCAGGGAATTAATTTGAACTTAAATTTGGTCAATTCTAATGAAGTATCAGCAACTGTGACGGTCAATCAAAACCA AGCAATTTTACCGCCAAGAAGTTTACATGGTTATCGAACTTCTAATCGATTTGTTAATCAAACGGATTATATTGACGTGT TACAATGGAAACTTCCTTTAAGTGGCGAAAGTCCTATTGGATATAAAATTTTTTCTGACGAAAATCTGAAAAAATTGGTC GCGAAAATTCCTTATAATACCACTGAGTATTATATTCATAATCGCCGTAAACAGAGTTCTTATACCTATTATATTGTTTC CGTCGATCAGTTTGGAAGGGTGTCGTTACCTATTTCAGTAAAGATAAAACCTTAA
Upstream 100 bases:
>100_bases AAAAAATAATTAAACGAAGAAATTAAAGGTGAAATTTGATATGGGTTTTCAAAAGTTCGTATGTTTTGCTAAGTTAAAAC ATCTATATCAAAGGTGAACA
Downstream 100 bases:
>100_bases AATTAGTTGATTGATGCCTAAATTAATTGGTAAAACATAAAAAATATGTCGTTAGGTAGAATTAGGAATTTTTTTCCTCG TTGAAATTCAGTATTTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP
Sequences:
>Translated_364_residues MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP >Mature_364_residues MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINADIPSFVKVGQVIEYTFIVSTT SSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYVVTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPL NLTKKANPTLFSAVGELITYTYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPLSGESPIGYKIFSDENLKKLV AKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISVKIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40492; Mature: 40492
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINAD CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC IPSFVKVGQVIEYTFIVSTTSSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYV CCHHHHHCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEE VTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPLNLTKKANPTLFSAVGELITY EEEECCCHHHHHHHEECCCCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHEE TYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA EEEEECCCHHHHEEEEEECCCCCEEECCCCEECCCCCCCEEEEEEEEECHHHCCCCCCHH IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPL HHCCCEEEEEEEECCCEEEEEEECCCCEECCCHHCCCEECCCCCCCCCCCEEEEEEEECC SGESPIGYKIFSDENLKKLVAKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISV CCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECEEEE KIKP EECC >Mature Secondary Structure MKTYFIYPTKSLTFLLFWISLFLNQYLSASTSAIEGKHPLLDSKFYLEQEEPFILTINAD CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC IPSFVKVGQVIEYTFIVSTTSSTQTYTNVTVSCPLLEGDILLDQTTVKIDQPATGMGEYV CCHHHHHCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEE VTQYDIDLKEIVCGAIAGGDISNDNTAVANSSITLPFLPLNLTKKANPTLFSAVGELITY EEEECCCHHHHHHHEECCCCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHEE TYQVTNLGDEEIESIKIEDNKIPFVSLPSTTLFPNQSLTTTASYVVTESDILQGSITNTA EEEEECCCHHHHEEEEEECCCCCEEECCCCEECCCCCCCEEEEEEEEECHHHCCCCCCHH IAQGINLNLNLVNSNEVSATVTVNQNQAILPPRSLHGYRTSNRFVNQTDYIDVLQWKLPL HHCCCEEEEEEEECCCEEEEEEECCCCEECCCHHCCCEECCCCCCCCCCCEEEEEEEECC SGESPIGYKIFSDENLKKLVAKIPYNTTEYYIHNRRKQSSYTYYIVSVDQFGRVSLPISV CCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECEEEE KIKP EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA