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The map label for this gene is 46446705

Identifier: 46446705

GI number: 46446705

Start: 1278131

End: 1279558

Strand: Reverse

Name: 46446705

Synonym: pc1071

Alternate gene names: NA

Gene position: 1279558-1278131 (Counterclockwise)

Preceding gene: 46446706

Following gene: 46446704

Centisome position: 53.0

GC content: 36.55

Gene sequence:

>1428_bases
ATGAAAACCTATTTCATCTATCCAATCAAATCATCGACTTTTTTATTATTTTGGATAAGTCTATTTCTTAATCAATATTT
GAGTGCTTCAACATCTGCGCTTGAGACAAACCACCCTTTATTAGACTCCAAATCCTATCTTGAGCAAGAAGAGCCTTTCA
ATTTAACGATCACTGCCGATCATTCCACTTTTGTAAAAACGGGTCAGGTCATTAATTTTACTTTTGTTGTATCAACAACT
TCACCTACTTTGACTTTCAAAGATGTCAACGTCACTTGTCAGTTGTTGGGGTGGGTTGTTCTGCTTGACCAAAAGACAGT
TAGCCTTAACCAATCAGCAACAGGTTCTGGTCTCTATCTTGCCTCGGCAGAGGATATCAACCAACAAAAAATTGTCATCA
CTGCACTAGCGGTAGGTTCTACAGAGTCGGGTGAAACATTTACTGCGTCGGCTTCTCTCACTTTACCCTATCTTCCGCTT
AATTTGACAAAGGAGGCTAGTCCTATGCTATTTTCTACTATTGACGAGAAAATCACTTATACTTATCAAGTCACAAATTT
AGGAGATGAGAACTTTCAATCCGTTGAAATTGAAGACGATAAATTAGGAACTATGAAAATCGCCGCACTCTTAGAAGCAG
GTAAATTAGCGACTTTAACGCAAACTTATCATGTGACTCAATCAGATTTAGATGTTGGAGAAATCGTTAATGTTGCCCGA
GCATCGGGTAAAAATCAATTTGAGGATGAAGTATTTTCTAACAACGTGACATGCGTTGTCAATGCTCAAAAAAAGTTTGA
TTTTGCATTAGCTAAGACAGCTGTTCCGGCAGTTATCAGCAACAAAGGAGAGATTATTAATTATCGATATGATTTAACCA
ATCAGGGAAATGTGACCCTTGAAAATATTGTAATTGAAGACGATAAAATCTCATTTGTCAATCTTCCTGCTACAACATTA
CTCCCTAGACAATCTTTGACAACTACTGCCTCTTATGTAGTCACTGAAAGTGATATTTTGCAAGGAAGCATTACGAATAC
GACAATTGCTAGAGGAACTAATATGCGTTTAAACTCGATTCAATCTAATTTAGCAACAACGACTGTGATGGTTGATGAAA
CTCAGACAATATTACCACCTAGAGATTTACGAGGTTATCGAACTTCTAATCAATTTATCAATCAAACGGATTATATTGAC
GTGTTGCAATGGCAAATTCCCTCTGGAGGAGAAGTTCCAACTGGATATAAAATTTTTTCCGATGTTGGGTTAAAGAAACT
TGTTGCCAAAGTTTCTGGTTATCATATAACAGAGTATCGTATTTATAATCGCCACAAACATCGGTCTTATACTTATTACA
TGGTCTCCGAGGACCAATTTGGAAAAATGTCGGCGCCGATTTCAATAAAAATTTATAGCAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAATAATTAAACGAAGAAATTAAAGTTGAAATTTGATATGGGTTTTCAAAAGCTCCGTATACTTCGCGAAGCTAAAAA
ATCCATATCAAAGGTGAACA

Downstream 100 bases:

>100_bases
TTAAACGAAGAAATTAAAGGTGAAATTTGATATGGGTTTTCAAAAGTTCGTATGTTTTGCTAAGTTAAAACATCTATATC
AAAGGTGAACAATGAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat-Containing Protein; Conserved Repeat Protein; Conserved Repeat Domain; Lipoprotein

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKTYFIYPIKSSTFLLFWISLFLNQYLSASTSALETNHPLLDSKSYLEQEEPFNLTITADHSTFVKTGQVINFTFVVSTT
SPTLTFKDVNVTCQLLGWVVLLDQKTVSLNQSATGSGLYLASAEDINQQKIVITALAVGSTESGETFTASASLTLPYLPL
NLTKEASPMLFSTIDEKITYTYQVTNLGDENFQSVEIEDDKLGTMKIAALLEAGKLATLTQTYHVTQSDLDVGEIVNVAR
ASGKNQFEDEVFSNNVTCVVNAQKKFDFALAKTAVPAVISNKGEIINYRYDLTNQGNVTLENIVIEDDKISFVNLPATTL
LPRQSLTTTASYVVTESDILQGSITNTTIARGTNMRLNSIQSNLATTTVMVDETQTILPPRDLRGYRTSNQFINQTDYID
VLQWQIPSGGEVPTGYKIFSDVGLKKLVAKVSGYHITEYRIYNRHKHRSYTYYMVSEDQFGKMSAPISIKIYSKK

Sequences:

>Translated_475_residues
MKTYFIYPIKSSTFLLFWISLFLNQYLSASTSALETNHPLLDSKSYLEQEEPFNLTITADHSTFVKTGQVINFTFVVSTT
SPTLTFKDVNVTCQLLGWVVLLDQKTVSLNQSATGSGLYLASAEDINQQKIVITALAVGSTESGETFTASASLTLPYLPL
NLTKEASPMLFSTIDEKITYTYQVTNLGDENFQSVEIEDDKLGTMKIAALLEAGKLATLTQTYHVTQSDLDVGEIVNVAR
ASGKNQFEDEVFSNNVTCVVNAQKKFDFALAKTAVPAVISNKGEIINYRYDLTNQGNVTLENIVIEDDKISFVNLPATTL
LPRQSLTTTASYVVTESDILQGSITNTTIARGTNMRLNSIQSNLATTTVMVDETQTILPPRDLRGYRTSNQFINQTDYID
VLQWQIPSGGEVPTGYKIFSDVGLKKLVAKVSGYHITEYRIYNRHKHRSYTYYMVSEDQFGKMSAPISIKIYSKK
>Mature_475_residues
MKTYFIYPIKSSTFLLFWISLFLNQYLSASTSALETNHPLLDSKSYLEQEEPFNLTITADHSTFVKTGQVINFTFVVSTT
SPTLTFKDVNVTCQLLGWVVLLDQKTVSLNQSATGSGLYLASAEDINQQKIVITALAVGSTESGETFTASASLTLPYLPL
NLTKEASPMLFSTIDEKITYTYQVTNLGDENFQSVEIEDDKLGTMKIAALLEAGKLATLTQTYHVTQSDLDVGEIVNVAR
ASGKNQFEDEVFSNNVTCVVNAQKKFDFALAKTAVPAVISNKGEIINYRYDLTNQGNVTLENIVIEDDKISFVNLPATTL
LPRQSLTTTASYVVTESDILQGSITNTTIARGTNMRLNSIQSNLATTTVMVDETQTILPPRDLRGYRTSNQFINQTDYID
VLQWQIPSGGEVPTGYKIFSDVGLKKLVAKVSGYHITEYRIYNRHKHRSYTYYMVSEDQFGKMSAPISIKIYSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52794; Mature: 52794

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYFIYPIKSSTFLLFWISLFLNQYLSASTSALETNHPLLDSKSYLEQEEPFNLTITAD
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEC
HSTFVKTGQVINFTFVVSTTSPTLTFKDVNVTCQLLGWVVLLDQKTVSLNQSATGSGLYL
CCEEEECCCEEEEEEEEECCCCEEEEEECCEEEEEEEEEEEEECCEEECCCCCCCCEEEE
ASAEDINQQKIVITALAVGSTESGETFTASASLTLPYLPLNLTKEASPMLFSTIDEKITY
EECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHEEECCCEEEE
TYQVTNLGDENFQSVEIEDDKLGTMKIAALLEAGKLATLTQTYHVTQSDLDVGEIVNVAR
EEEEEECCCCCCEEEEECCCCCCCEEEEEHHCCCCEEEEEEEEEEECCCCCHHHHHHHHH
ASGKNQFEDEVFSNNVTCVVNAQKKFDFALAKTAVPAVISNKGEIINYRYDLTNQGNVTL
HCCCCCCHHHHHCCCEEEEEECCHHCCHHHHHHHCCCEECCCCCEEEEEEECCCCCCEEE
ENIVIEDDKISFVNLPATTLLPRQSLTTTASYVVTESDILQGSITNTTIARGTNMRLNSI
EEEEEECCCEEEEECCHHHCCCCCCCCCEEEEEEEECHHHCCCCCCCEEECCCCCCHHHH
QSNLATTTVMVDETQTILPPRDLRGYRTSNQFINQTDYIDVLQWQIPSGGEVPTGYKIFS
HCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
DVGLKKLVAKVSGYHITEYRIYNRHKHRSYTYYMVSEDQFGKMSAPISIKIYSKK
HCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKTYFIYPIKSSTFLLFWISLFLNQYLSASTSALETNHPLLDSKSYLEQEEPFNLTITAD
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEC
HSTFVKTGQVINFTFVVSTTSPTLTFKDVNVTCQLLGWVVLLDQKTVSLNQSATGSGLYL
CCEEEECCCEEEEEEEEECCCCEEEEEECCEEEEEEEEEEEEECCEEECCCCCCCCEEEE
ASAEDINQQKIVITALAVGSTESGETFTASASLTLPYLPLNLTKEASPMLFSTIDEKITY
EECCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHEEECCCEEEE
TYQVTNLGDENFQSVEIEDDKLGTMKIAALLEAGKLATLTQTYHVTQSDLDVGEIVNVAR
EEEEEECCCCCCEEEEECCCCCCCEEEEEHHCCCCEEEEEEEEEEECCCCCHHHHHHHHH
ASGKNQFEDEVFSNNVTCVVNAQKKFDFALAKTAVPAVISNKGEIINYRYDLTNQGNVTL
HCCCCCCHHHHHCCCEEEEEECCHHCCHHHHHHHCCCEECCCCCEEEEEEECCCCCCEEE
ENIVIEDDKISFVNLPATTLLPRQSLTTTASYVVTESDILQGSITNTTIARGTNMRLNSI
EEEEEECCCEEEEECCHHHCCCCCCCCCEEEEEEEECHHHCCCCCCCEEECCCCCCHHHH
QSNLATTTVMVDETQTILPPRDLRGYRTSNQFINQTDYIDVLQWQIPSGGEVPTGYKIFS
HCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
DVGLKKLVAKVSGYHITEYRIYNRHKHRSYTYYMVSEDQFGKMSAPISIKIYSKK
HCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA