Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446695

Identifier: 46446695

GI number: 46446695

Start: 1262887

End: 1263300

Strand: Direct

Name: 46446695

Synonym: pc1061

Alternate gene names: NA

Gene position: 1262887-1263300 (Clockwise)

Preceding gene: 46446694

Following gene: 46446699

Centisome position: 52.31

GC content: 33.33

Gene sequence:

>414_bases
ATGCCCTCTGTTAGTTTTAAACAAGAAATTTTCATTCCTTTTCATTATGTAGACGCCGCAGGGATTTTATTTTTTGGACA
TACCTTTACTTTAGCTCATCAAGTTTTTGAAAGCTTCGTCGTACAAGCACTTTGTTGCTCATGGGCACAATGGTTTCAAA
ATCCCTCTTGGATTGTCCCTATCAAAAACGCTGAAGCTTCTTTCCAAGCTCCTTTATTAGCAGGACTTTCGTGTCAAGTT
CAACTAAGCATTGAAGAAATTAAACAAAACTCTTTTTCTGTTCATTATGAATTTATTCAAAATGATCAACTTTGTTGTAT
GGTCAAAACCATTCACGTATTTTGTAATCGACAAAGTAAGGATAAACTTCTAATCCCCAATGAAATTAAAAGCCAATTAG
AATTATATTTTTGA

Upstream 100 bases:

>100_bases
TACGGGTCGTTATTCATTAGCAGGAGGTATTGCAACGATCATTACTGGTTTTAAACCCATGAAATAAACGATATATAAAC
ATATTCCATGTTGAGAAAAG

Downstream 100 bases:

>100_bases
GGATTTGTTTATTCGTTCAAAGTTATTAATTTAATCAGCTCGCTTTTTAATATTTTTCCTAGAGGTGAACGGGGAATATT
TTCAACAGCAATAACGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQV
QLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF

Sequences:

>Translated_137_residues
MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQV
QLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF
>Mature_136_residues
PSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVPIKNAEASFQAPLLAGLSCQVQ
LSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSKDKLLIPNEIKSQLELYF

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15811; Mature: 15680

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVP
CCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IKNAEASFQAPLLAGLSCQVQLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSK
ECCCCCCCCCHHHCCCEEEEEEEHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCC
DKLLIPNEIKSQLELYF
CCEECCHHHHHHHEECC
>Mature Secondary Structure 
PSVSFKQEIFIPFHYVDAAGILFFGHTFTLAHQVFESFVVQALCCSWAQWFQNPSWIVP
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IKNAEASFQAPLLAGLSCQVQLSIEEIKQNSFSVHYEFIQNDQLCCMVKTIHVFCNRQSK
ECCCCCCCCCHHHCCCEEEEEEEHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCC
DKLLIPNEIKSQLELYF
CCEECCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA