Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446684

Identifier: 46446684

GI number: 46446684

Start: 1250725

End: 1251381

Strand: Direct

Name: 46446684

Synonym: pc1050

Alternate gene names: NA

Gene position: 1250725-1251381 (Clockwise)

Preceding gene: 46446683

Following gene: 46446685

Centisome position: 51.8

GC content: 29.22

Gene sequence:

>657_bases
ATGAAAAAAAGTTTTTTGACTGGTTTTGCTATTTTATTTCCCGTGATACTCACTATCATTATCATTGGCTTTTTCATCAA
CTTTTTGACTTATCCTTTTTTGAACCTTACTAAATTTTGGTTAAATCAATTTAATTGGTATGAAAATTATTCTATTCTAT
TTGCAGATTTAGGGATCACTCATTTTATCAGTCAATTATTAATTTTAGGATTACTAATAGGTATTATTTTTGGCGTTGGA
TTACTAGGGCAACTTTTTTTAATTAATTATATTTTAAAATTAGGGAATACCTTAATTTTAGCCATCCCCTACATCAATAA
AATTTATAAGTTTTCTCAAGAATTTGTCTTCAGTTTGTTTTCCTCCCACTCTAAATCCTTTGCTTATGTAGTACTAGCTC
CATATCCCTCTGTAAACCATTTAAGCTTAGGATTTGTCTCGAAAAGTCTTTTAAATTTTCAAGAGCATGAACGTTTAATC
TCTGTCTTCATCCCCGGAACACCTAATCCTTCTATTGGATATACGTTAAAATTTAAAAAGAAGGATCTTCTTTTTCTCGA
TATGAAGATTGATGAAGCAATGAAATTTGTGATATCTTTTGGAACTATAACGCATGATTTTAAACTTCTCGACCCAAATA
AATGCCATGAAATCTAA

Upstream 100 bases:

>100_bases
TGATTACACCTTCATTCCATCCTATTCAAAAAAAGCCCGATAGCACCCCTTCTTACGAATTAAATTCTCCTCCAATTTCT
TTTCAAGAAACATAAGAGAT

Downstream 100 bases:

>100_bases
AGTTTATTTTTTTAATGTTAAAGATAACCAAGCTAAAATTCATTTGATTTGCTCAAAAGCAAAGGAATCTTTTGAGCAAG
AGAAACGACTACAAATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG
LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI
SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI

Sequences:

>Translated_218_residues
MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG
LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI
SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI
>Mature_218_residues
MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGITHFISQLLILGLLIGIIFGVG
LLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLFSSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLI
SVFIPGTPNPSIGYTLKFKKKDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25042; Mature: 25042

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
HFISQLLILGLLIGIIFGVGLLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH
SSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLISVFIPGTPNPSIGYTLKFKK
HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECC
KDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI
CCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCHHCCCC
>Mature Secondary Structure
MKKSFLTGFAILFPVILTIIIIGFFINFLTYPFLNLTKFWLNQFNWYENYSILFADLGIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
HFISQLLILGLLIGIIFGVGLLGQLFLINYILKLGNTLILAIPYINKIYKFSQEFVFSLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH
SSHSKSFAYVVLAPYPSVNHLSLGFVSKSLLNFQEHERLISVFIPGTPNPSIGYTLKFKK
HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECC
KDLLFLDMKIDEAMKFVISFGTITHDFKLLDPNKCHEI
CCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA