| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446602
Identifier: 46446602
GI number: 46446602
Start: 1162956
End: 1163726
Strand: Reverse
Name: 46446602
Synonym: pc0968
Alternate gene names: NA
Gene position: 1163726-1162956 (Counterclockwise)
Preceding gene: 46446603
Following gene: 46446601
Centisome position: 48.2
GC content: 32.17
Gene sequence:
>771_bases ATGAATCTTTGTGTCGATATTGTTAATTCTTATCAAGAGCTTAGTAAAGATGTCCATGTCAGTAAAGAAACAGGTCTTCC TGGTATTACAGATGAGGTGGCACAAAAATTTTTGAACCGAATCGGTTCATCGGCTTCTTTTTCACACATGAGTATTTCAG TTAGTATGACCACACAAATTCCTTTGGATCTTTGCTATAGTCTTTATAAATTTTATTTTTACCAAATTAAAAAGATTAAT GATTTAACAGATGAAAATGCCATTTTAATACAGCTTGACAAAACTAAACAAATTGCGGATAAAGCTATTAAAGAATTTCG AGAATGTATGAAATTAATTGATGTAGGCGTAACACGAGAAATGGCCAAAGTTTTACCAAATTTCCTGTTAAATTATTTGT ATGGGACTGAATTTGTGAAATTAACAGGTAAAATAAATCCAGGCTGCCAAATTGAAGAATTGACAAATTATTTTATTAGT CAAGTGCCTGAAACAAAGCTGGTCAATTTCCGCTTAGTTATTCAAAAAATGCGAAATATACATCTACCTTCTAACTTGTG GGCCATCGATGATTATAGACACAAAGTACCAAAACAAACAATGATACCAGCTGAAGTTTTTGCCAGGGTTCATCATCGAG CAATGGAAGATATGGTGCATCTATTTCATCAACATGCCGCTAATTTTGTAGATAAAATGCTAATAGATGAATTTTTTGAG GATTTCCCGGTTTTTCAAATCAATAAAGAAAGAGTAAGAGAGTTTATATGA
Upstream 100 bases:
>100_bases TATCAAACCTTGAGTTTCAAAAACGAAAGTAATGATAAAATAAATTTTGAAAAAACAACTTGAATTTTTAACAAAAATGT ATGATTAATTGGAGGAAATT
Downstream 100 bases:
>100_bases ATAATATTGATTTATGTGATAATAACAACAAACATTATTTAGCTGGTTATCAAAGTTGTCAAGAACAGGCATCCACACAA AAAAATATACAAACGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE DFPVFQINKERVREFI
Sequences:
>Translated_256_residues MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE DFPVFQINKERVREFI >Mature_256_residues MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQIPLDLCYSLYKFYFYQIKKIN DLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTREMAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFIS QVPETKLVNFRLVIQKMRNIHLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE DFPVFQINKERVREFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29862; Mature: 29862
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQI CCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC PLDLCYSLYKFYFYQIKKINDLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTRE CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH MAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFISQVPETKLVNFRLVIQKMRNI HHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC HLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE CCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFPVFQINKERVREFI HCCCEEECHHHHHHCC >Mature Secondary Structure MNLCVDIVNSYQELSKDVHVSKETGLPGITDEVAQKFLNRIGSSASFSHMSISVSMTTQI CCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCC PLDLCYSLYKFYFYQIKKINDLTDENAILIQLDKTKQIADKAIKEFRECMKLIDVGVTRE CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHH MAKVLPNFLLNYLYGTEFVKLTGKINPGCQIEELTNYFISQVPETKLVNFRLVIQKMRNI HHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC HLPSNLWAIDDYRHKVPKQTMIPAEVFARVHHRAMEDMVHLFHQHAANFVDKMLIDEFFE CCCCCCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFPVFQINKERVREFI HCCCEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA