Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446600

Identifier: 46446600

GI number: 46446600

Start: 1161496

End: 1161750

Strand: Reverse

Name: 46446600

Synonym: pc0966

Alternate gene names: NA

Gene position: 1161750-1161496 (Counterclockwise)

Preceding gene: 46446601

Following gene: 46446598

Centisome position: 48.12

GC content: 30.2

Gene sequence:

>255_bases
ATGAACATAAGTAGCTTCAAATTACATTATCAAGGGTCATTAATCTGGTTAATTTTTTGGATGTTTGTTTTTTTTCCAAT
AGCCTTTGTTTTACTATTTACAAGCAGCACTTTCGAACTTGATCATTCAGTTTATTATCTTCGTTATAATGGCTCTCGTT
TTTGGCTTTGCTTTTGGGTTTTGTTTTTTTTCCCCATTGCTTTCATTTTCATTTTTGTAAATGGCTTGTCTTTGTTTCAA
GAGCGAATATTTTAA

Upstream 100 bases:

>100_bases
TTTTAAAGATTAAAAAGCACAAATTTATGTAAAAAAGTCGGGCTTAAGCGAAAAAAATACTTAAAAATGCATTAATAAAA
AATTTAATAATTGGTAAAAA

Downstream 100 bases:

>100_bases
CTCCTCTTTTGCCATCCATATTTTGTACACTTGTTAAAAGAAAGGAAATTTTTTTTGAAAAATTAGAATAAGAAGACGAA
TTTTATTCCATGATTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNISSFKLHYQGSLIWLIFWMFVFFPIAFVLLFTSSTFELDHSVYYLRYNGSRFWLCFWVLFFFPIAFIFIFVNGLSLFQ
ERIF

Sequences:

>Translated_84_residues
MNISSFKLHYQGSLIWLIFWMFVFFPIAFVLLFTSSTFELDHSVYYLRYNGSRFWLCFWVLFFFPIAFIFIFVNGLSLFQ
ERIF
>Mature_84_residues
MNISSFKLHYQGSLIWLIFWMFVFFPIAFVLLFTSSTFELDHSVYYLRYNGSRFWLCFWVLFFFPIAFIFIFVNGLSLFQ
ERIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10325; Mature: 10325

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISSFKLHYQGSLIWLIFWMFVFFPIAFVLLFTSSTFELDHSVYYLRYNGSRFWLCFWV
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHH
LFFFPIAFIFIFVNGLSLFQERIF
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNISSFKLHYQGSLIWLIFWMFVFFPIAFVLLFTSSTFELDHSVYYLRYNGSRFWLCFWV
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHH
LFFFPIAFIFIFVNGLSLFQERIF
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA