Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446558

Identifier: 46446558

GI number: 46446558

Start: 1117542

End: 1118012

Strand: Reverse

Name: 46446558

Synonym: pc0924

Alternate gene names: NA

Gene position: 1118012-1117542 (Counterclockwise)

Preceding gene: 46446559

Following gene: 46446553

Centisome position: 46.3

GC content: 38.22

Gene sequence:

>471_bases
ATGTATCAGAAGATTGATTATGCAGTGATCAAGAACGGTATTCTTTCTGGTGTCGCTTATGCCGCTCACGCAGCTCACCA
AACAAAAGAAATCTTTGGAAATTTAGCTGGACATGCAGTTAGAGTTATTAAATCAGGAGCGAATTACGCTCAGAGAGAAG
TGAACCGGGCTCAACCTTACTTGAAAAATCCTTATATAGCTGCAACTTCTGTCGCTACTGTAAGTATTATAAACCTTATA
ATAGCTGATGCTATTGTAGCAATTGTTCGAAAGATTTTACCTTCGGAAACAAAGACCCAAAAATCTGTTAATGAAGTTGT
TTCTAGCTTAACTGGTGTTGTGACTTGGCTTGGTGGTATGTGGGCTTATAGATATTATGCACAAATTCCTTTGTCTCTAC
CTATCTATGCTGTGAGCACTATAGCTGGCTCACTGATTCTAGGTATAAGCAACTCGCAAAAGTTTTTTTAA

Upstream 100 bases:

>100_bases
GCTGTGAGTGCAGCAACAATTGGCATTTATTTGTTAATTAAAACAAAATTTTTGACTTTATATTAAGTAATAACCTTAAA
CTTTAACAATTGGAACTTTT

Downstream 100 bases:

>100_bases
TTTATTTTGATGAGTGACAAGGATTTGTTTAACATTCCTTGTCATTCTTTATCAATAGGATTTAAAAAAACTGACTAGGC
TTCTTTATTCTTATCCCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MYQKIDYAVIKNGILSGVAYAAHAAHQTKEIFGNLAGHAVRVIKSGANYAQREVNRAQPYLKNPYIAATSVATVSIINLI
IADAIVAIVRKILPSETKTQKSVNEVVSSLTGVVTWLGGMWAYRYYAQIPLSLPIYAVSTIAGSLILGISNSQKFF

Sequences:

>Translated_156_residues
MYQKIDYAVIKNGILSGVAYAAHAAHQTKEIFGNLAGHAVRVIKSGANYAQREVNRAQPYLKNPYIAATSVATVSIINLI
IADAIVAIVRKILPSETKTQKSVNEVVSSLTGVVTWLGGMWAYRYYAQIPLSLPIYAVSTIAGSLILGISNSQKFF
>Mature_156_residues
MYQKIDYAVIKNGILSGVAYAAHAAHQTKEIFGNLAGHAVRVIKSGANYAQREVNRAQPYLKNPYIAATSVATVSIINLI
IADAIVAIVRKILPSETKTQKSVNEVVSSLTGVVTWLGGMWAYRYYAQIPLSLPIYAVSTIAGSLILGISNSQKFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16887; Mature: 16887

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQKIDYAVIKNGILSGVAYAAHAAHQTKEIFGNLAGHAVRVIKSGANYAQREVNRAQPY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
LKNPYIAATSVATVSIINLIIADAIVAIVRKILPSETKTQKSVNEVVSSLTGVVTWLGGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WAYRYYAQIPLSLPIYAVSTIAGSLILGISNSQKFF
HHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MYQKIDYAVIKNGILSGVAYAAHAAHQTKEIFGNLAGHAVRVIKSGANYAQREVNRAQPY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
LKNPYIAATSVATVSIINLIIADAIVAIVRKILPSETKTQKSVNEVVSSLTGVVTWLGGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WAYRYYAQIPLSLPIYAVSTIAGSLILGISNSQKFF
HHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA