| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446559
Identifier: 46446559
GI number: 46446559
Start: 1118047
End: 1118481
Strand: Reverse
Name: 46446559
Synonym: pc0925
Alternate gene names: NA
Gene position: 1118481-1118047 (Counterclockwise)
Preceding gene: 46446560
Following gene: 46446558
Centisome position: 46.32
GC content: 30.57
Gene sequence:
>435_bases ATGAATTTTAATATTAGTTTTGATTTTCTCGATGGATTTTGCCAAAATTCTTTAAAAGATCGCACGAAACATCCAACTTT TTTTAAAGATCATTTAATTTCTTTTGTAAGCCAAACTTCAAAATATACGCGAAATAATTACTTGCCTATTTTAGCGACCA TTATTACAAGTATCGCTACAACAGAATTGGTGTTATTTGTTTCTCGATCGATTTCAAGATTTAGCCAATTTTATCCTGAT CGGTTGATGGAAACAGAAAAAAATGTGGTAGCTTTCTTAACTTTTCCAATACTTGGTGGGATGATTATTGGATTGAATTA TGCTGTTTTTCAAGCTTTAAGGCTACCTCTTTCACCTTTAGTTAGCACGGCTGTGAGTGCAGCAACAATTGGCATTTATT TGTTAATTAAAACAAAATTTTTGACTTTATATTAA
Upstream 100 bases:
>100_bases CCAATATATCTGTTTCAAAGTATGCCCTTATTTGTATAGCAACTTCTTGTGCACAAATTGGTTTTCAACTTTTACGTGCA GAATTTAGACAGAGTTAATC
Downstream 100 bases:
>100_bases GTAATAACCTTAAACTTTAACAATTGGAACTTTTATGTATCAGAAGATTGATTATGCAGTGATCAAGAACGGTATTCTTT CTGGTGTCGCTTATGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNFNISFDFLDGFCQNSLKDRTKHPTFFKDHLISFVSQTSKYTRNNYLPILATIITSIATTELVLFVSRSISRFSQFYPD RLMETEKNVVAFLTFPILGGMIIGLNYAVFQALRLPLSPLVSTAVSAATIGIYLLIKTKFLTLY
Sequences:
>Translated_144_residues MNFNISFDFLDGFCQNSLKDRTKHPTFFKDHLISFVSQTSKYTRNNYLPILATIITSIATTELVLFVSRSISRFSQFYPD RLMETEKNVVAFLTFPILGGMIIGLNYAVFQALRLPLSPLVSTAVSAATIGIYLLIKTKFLTLY >Mature_144_residues MNFNISFDFLDGFCQNSLKDRTKHPTFFKDHLISFVSQTSKYTRNNYLPILATIITSIATTELVLFVSRSISRFSQFYPD RLMETEKNVVAFLTFPILGGMIIGLNYAVFQALRLPLSPLVSTAVSAATIGIYLLIKTKFLTLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16335; Mature: 16335
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNISFDFLDGFCQNSLKDRTKHPTFFKDHLISFVSQTSKYTRNNYLPILATIITSIAT CCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TELVLFVSRSISRFSQFYPDRLMETEKNVVAFLTFPILGGMIIGLNYAVFQALRLPLSPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VSTAVSAATIGIYLLIKTKFLTLY HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFNISFDFLDGFCQNSLKDRTKHPTFFKDHLISFVSQTSKYTRNNYLPILATIITSIAT CCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TELVLFVSRSISRFSQFYPDRLMETEKNVVAFLTFPILGGMIIGLNYAVFQALRLPLSPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VSTAVSAATIGIYLLIKTKFLTLY HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA