Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446541

Identifier: 46446541

GI number: 46446541

Start: 1098715

End: 1100529

Strand: Reverse

Name: 46446541

Synonym: pc0907

Alternate gene names: NA

Gene position: 1100529-1098715 (Counterclockwise)

Preceding gene: 46446542

Following gene: 46446539

Centisome position: 45.58

GC content: 33.44

Gene sequence:

>1815_bases
ATGAAAATATTTCATCATTCCAAGCGCATTTTTATTTTGTTAAAAGATTGTATTTATCCTCTTTTCAATTACTTAAGACA
AGGATATCGATCAAATCTGCTCAAAGTTCATTGGGCTAGTTTTGCAAAACACAGCTTCCGTCATCTTCAATCACTAGGAG
CAGCTTTAAATAAAGAGTGTCGTGATTTAGGAGATTTACAGGGCCCTCGAATAAAAAAGCTTCGCCAATTGACTATTGGT
CTGCATACTTTAATGTCTTCCTCTGAACCTTCATTTTCTTATTCAATTTTAATTCCTGTTTCAGATTCACTAAGAAAAAA
TTGTTTTTGCAAAGCTCTTTTTTCTGCTCTCCAACAAACAGCACCTAACTTCGAAATTTTGGTTGGTTATAACAAGGAGC
AACAAACTAAAGAAATTGAGACACTAATTAAAGGATATCAAAATGAATATCCTCAATTAATTAAAACATTTTCATTTTCT
GATCATTCTCTCACACAGATTTTAAACTCTCTAGCACAATTTGCTGAAGGGAATTTCCTTTTTGTTTTAGACCCTGAAGA
TTGGATTCGACCAGATTTTTTCTTCCGGTGCGAACAATTTTTAAGACTCATAAAAGAAAAGGAGAATGGGTGTATTTATA
CAGATGAATATGAAATCACCGAAAACGATGATCCCATTCCAGGGAGGCTCTTTTCTAAACCAAACGAATTAGTTTTTCCT
TATCTTTTTCATCAAGCTTTAGGGAGCAGTGTCTTAATTCCACGTCAATTATGGAATAGAGCTGGAGGAATGGAAGAAAT
TAATAAAGAGGAATTATATTGGGATTTGGCTTTAAGATTAGATTTAGCTGGGGCAAAATTCTACCATCTACCTTTTTATC
TATATGCGAAGCGTTGTATAAATCCCCACTTTCAACCAAAAGCAGCATCTCTTTTATTTGTCAAACAATTAGAAAAATAT
AGCTTAGCAAAAAAATTAACATGGTCATGGGGTAAAGGATTAATTTCCCAAACCTACCGAGCTATTCCAGCTTTAACCGC
TGTTCCAAAAGTTCAAGTAATCATCCCTTTTAAAAATCAAAAAATTCTGACTTTAAAAACGATCCATAGTATTTTGAAGC
AAAAAAATGTTCAAGTCTTTGTGACAGCTATTGATAACGACAGTCAAGATGAAACAATTGCTTCAGAAATTCGAAAATTG
GGTAGTGAAGTAATTATTGTTAAAGAACCTTTCAACTATTCGAGATTAAATAATATTGCTGTTGAGAGAACTATTTATGC
CAAGAATTGCGATTATCTTCTCTTTCTTAATAATGACGTAGAACTTGAAGAAGATGCCTTAGAGGAAATGTGCCGATGGA
TTGATCAACCTATGATTGGAATGGTGGGATGTCAACTGCATTATCCTAATGGGTTATTACAGCATGGGGGAATTGACATT
AAACGCGATGCACCAGCTAATCAATTAATGTGGATTAACTCAGAAAAACTTGCTCCAAAAACGAATCAAAAAATGACAAA
AATCATTCGTTTAGTGGATGCTGTCACCGCAGCTTGCTCACTAATGAAAAAAACTTTATTTGTAGAAGTCGGAGGATTTG
ATGAAATATGGTACCCGATTGCTTACAGCGATACTAATTTAGCAACTAAAGTTAAATCTAAAGGTTTTTATTGTTTATAT
ACTCCTTATGCAAAAGGAATCCACCACGAAAGTGCTTCACGTAAATTTGAAAATATTGAAGATGTGGAAATGTCTAGCTG
GCTTGATAAGCAATTTTTTGAAAATTATTCGCTGAAGAAACAATCAAAAATTTAA

Upstream 100 bases:

>100_bases
ATGCGCTAATCAATTAAACAATTGATTAAGGCAAATCTAAACTTTCTGCATTAAATAGCTTTATGTTATTTTCCAATATT
CCATATTACAAAGAACCATC

Downstream 100 bases:

>100_bases
TTATTCATTCTTTTCTATCTCCATTTATTGAACATTTTCCTTAAAATAATTTTGGCTGTATTTTTAAAGCCTTTTTCATA
AACTTGATGGATAACAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG
LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS
DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP
YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY
SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL
GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI
KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY
TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI

Sequences:

>Translated_604_residues
MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG
LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS
DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP
YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY
SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL
GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI
KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY
TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI
>Mature_604_residues
MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKECRDLGDLQGPRIKKLRQLTIG
LHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQTAPNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFS
DHSLTQILNSLAQFAEGNFLFVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP
YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCINPHFQPKAASLLFVKQLEKY
SLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQKILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKL
GSEVIIVKEPFNYSRLNNIAVERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI
KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPIAYSDTNLATKVKSKGFYCLY
TPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKKQSKI

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 69900; Mature: 69900

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKEC
CCCEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
RDLGDLQGPRIKKLRQLTIGLHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQT
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC
APNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFSDHSLTQILNSLAQFAEGNFL
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE
FVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP
EEECCHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCHHCCCCCCCHHH
YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCI
HHHHHHCCCCCEEHHHHHHHCCCHHHCCHHHHEEEEEEEEEECCCEEEECHHHHHHHHHC
NPHFQPKAASLLFVKQLEKYSLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKLGSEVIIVKEPFNYSRLNNIA
EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCC
VERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI
EEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHCCCEEE
KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPI
ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE
AYSDTNLATKVKSKGFYCLYTPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKK
EECCCCHHHHHHCCCEEEEECHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
QSKI
HCCC
>Mature Secondary Structure
MKIFHHSKRIFILLKDCIYPLFNYLRQGYRSNLLKVHWASFAKHSFRHLQSLGAALNKEC
CCCEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
RDLGDLQGPRIKKLRQLTIGLHTLMSSSEPSFSYSILIPVSDSLRKNCFCKALFSALQQT
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC
APNFEILVGYNKEQQTKEIETLIKGYQNEYPQLIKTFSFSDHSLTQILNSLAQFAEGNFL
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE
FVLDPEDWIRPDFFFRCEQFLRLIKEKENGCIYTDEYEITENDDPIPGRLFSKPNELVFP
EEECCHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCHHCCCCCCCHHH
YLFHQALGSSVLIPRQLWNRAGGMEEINKEELYWDLALRLDLAGAKFYHLPFYLYAKRCI
HHHHHHCCCCCEEHHHHHHHCCCHHHCCHHHHEEEEEEEEEECCCEEEECHHHHHHHHHC
NPHFQPKAASLLFVKQLEKYSLAKKLTWSWGKGLISQTYRAIPALTAVPKVQVIIPFKNQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KILTLKTIHSILKQKNVQVFVTAIDNDSQDETIASEIRKLGSEVIIVKEPFNYSRLNNIA
EEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCC
VERTIYAKNCDYLLFLNNDVELEEDALEEMCRWIDQPMIGMVGCQLHYPNGLLQHGGIDI
EEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHCCCEEE
KRDAPANQLMWINSEKLAPKTNQKMTKIIRLVDAVTAACSLMKKTLFVEVGGFDEIWYPI
ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE
AYSDTNLATKVKSKGFYCLYTPYAKGIHHESASRKFENIEDVEMSSWLDKQFFENYSLKK
EECCCCHHHHHHCCCEEEEECHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
QSKI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]