Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446495

Identifier: 46446495

GI number: 46446495

Start: 1041428

End: 1042282

Strand: Direct

Name: 46446495

Synonym: pc0861

Alternate gene names: NA

Gene position: 1041428-1042282 (Clockwise)

Preceding gene: 46446494

Following gene: 46446496

Centisome position: 43.13

GC content: 39.06

Gene sequence:

>855_bases
ATGGCATATTCTCTTCCAAGCGAGCATGAAAGCAGCGTACAAATTCAAGGAGTTGAAATCTTTTTAGGATTTCCTGATGA
ATTTAAGTTTGAATGGATTGGTCAAAGAGATGTTATGGAACAGTTACTTGCTGCTTGGTTAGTGATTGATAAAAATGATA
TTCCACTTAATCCCCGTTTGATTGGTAAACCAGGGGTTGGTAAAACAACTTTGGCATATGCTGCAGCAAAAAAAATCAAC
AGGCCTGTTTATATTTTCCAATGTACAATGGACACCCGCCCAGAAGATTTATTAATTACTCCTGTTGTTGATCAAGGTGG
GGGGATAAGATATGTAGCTTCGGCTCTTGTAACAGCCATGATTCGAGGAGGTGTCTGTATTCTAGACGAGGCGAATCGAA
TGAGTGAAAAGTCATGGGCTTCTTTAGCCCCTCTTTTAGATACACGTCGCTATATCGAGTCCATAGTTGCCGGTTTAAAG
GTTTCAGCTCATCCAGAATTTCGTATTTGCGTGACAATGAACGATGATGCTTCAACATTTGAAATTCCAGAATATATCCA
TAGCCGCCTTCAACCACAAATCTATCTCGATTTTCCTGAAGCAGAAGAAGAACGCCGGATACTTCGAGAAAATCTTCCCT
TCGTTGATGAATACATCATGGAATACGTGGTCAATTTCCTACAAAAAGCTCATACAAGCCGTGAAAATTATACGATCCGA
GACGGAATTAACATTGCTCGTTATGCTGCTAAACGAATTAAAAGCTTAAATGGTAATAGTGGGAATATTGAAAATTTATT
GCGTGAGGCTATTTTAATGACTCTGGGAGATGAAGCTTTAATATACGTGCTTTAG

Upstream 100 bases:

>100_bases
CTAAAGCTGGTCTAATTTACGGTTCTCAAAAAGCCGCGACACCTTGAGAATTACAAGATCAAATTTTTTATCATTTACCT
AATTAATTATAGGATTAAAA

Downstream 100 bases:

>100_bases
AGGTCTTATGCTCACAAACGATTTATTTTATCTTCAAAAAGGGCATATTTACGCTGTTCCTATTATTCATTATAATATGG
AAATGGCTACGCAAGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: AAA Family ATPase; Regulatory Protein; ATPase; ATPase AAA Family

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKIN
RPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLK
VSAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR
DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL

Sequences:

>Translated_284_residues
MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKIN
RPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLK
VSAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR
DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL
>Mature_283_residues
AYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKINR
PVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKV
SAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIRD
GINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32188; Mature: 32057

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRL
CCCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEE
IGKPGVGKTTLAYAAAKKINRPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAM
ECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
IRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKVSAHPEFRICVTMNDDASTF
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCE
EIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR
ECHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
AYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRL
CCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEE
IGKPGVGKTTLAYAAAKKINRPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAM
ECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
IRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKVSAHPEFRICVTMNDDASTF
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCE
EIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR
ECHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA