Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446470

Identifier: 46446470

GI number: 46446470

Start: 1019516

End: 1019782

Strand: Direct

Name: 46446470

Synonym: pc0836

Alternate gene names: NA

Gene position: 1019516-1019782 (Clockwise)

Preceding gene: 46446469

Following gene: 46446471

Centisome position: 42.23

GC content: 34.83

Gene sequence:

>267_bases
ATGCAAAGAAAGTACCAGAGGTCAAATGCCTTAAATGAATTGAGAGAGTTTGGTCTTATCAACATAAATTATCCTGATGA
ATTAAGACAATCGGTTGAAGAAGCAATCAAATCTTGGAAAAATTTTTGTTATTTGCCTGCGGAGGAAAAATTAGCCTTTG
CTTTTCTTGAAGACAATCACGGAGATGGGTCAGGTTATGAATTAAAAGAAGACAAAGGATGGAAAAAAGACCTCAAAGAA
AATTTCCATGTCACGCTTTTTCACTGA

Upstream 100 bases:

>100_bases
GGGACTGAAGCTCCTATTCGTCTTTTAGGAATGTTTCCTGGATGACAAATATGTTTTTTCTTTTTAAGATCGTTACATCA
ATGTTAGAAAAATTAAATGA

Downstream 100 bases:

>100_bases
TCGGCTTATCCAAATTGCTAATCAACGAACTTTTTCTTTTTTAAATGATGCAAAAATTCTTCTCGATAAAATAGAGCCCC
TGATATTAGAGTTTTCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MQRKYQRSNALNELREFGLININYPDELRQSVEEAIKSWKNFCYLPAEEKLAFAFLEDNHGDGSGYELKEDKGWKKDLKE
NFHVTLFH

Sequences:

>Translated_88_residues
MQRKYQRSNALNELREFGLININYPDELRQSVEEAIKSWKNFCYLPAEEKLAFAFLEDNHGDGSGYELKEDKGWKKDLKE
NFHVTLFH
>Mature_88_residues
MQRKYQRSNALNELREFGLININYPDELRQSVEEAIKSWKNFCYLPAEEKLAFAFLEDNHGDGSGYELKEDKGWKKDLKE
NFHVTLFH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10483; Mature: 10483

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKYQRSNALNELREFGLININYPDELRQSVEEAIKSWKNFCYLPAEEKLAFAFLEDNH
CCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCC
GDGSGYELKEDKGWKKDLKENFHVTLFH
CCCCCCCCCCCCCHHHHHHCCCCEEEEC
>Mature Secondary Structure
MQRKYQRSNALNELREFGLININYPDELRQSVEEAIKSWKNFCYLPAEEKLAFAFLEDNH
CCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCC
GDGSGYELKEDKGWKKDLKENFHVTLFH
CCCCCCCCCCCCCHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA