Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446471

Identifier: 46446471

GI number: 46446471

Start: 1019945

End: 1020367

Strand: Direct

Name: 46446471

Synonym: pc0837

Alternate gene names: NA

Gene position: 1019945-1020367 (Clockwise)

Preceding gene: 46446470

Following gene: 46446472

Centisome position: 42.24

GC content: 36.88

Gene sequence:

>423_bases
ATGGATTCTTCGTTACTTACATTATTTCGGGGACCAGCAAGAAAGGTTTGTAATTGCAGCTCCACATGTCGACAAGGTGG
TTTTACTCTTCACCTTTTTGAAAGTGATGAGGGATTACAATATTGCTGTTTAAAAGAGCTGGAATGGAAAGCCATGCCTA
TTGATGAAAAACAAACAGTAATCATTCCAGCCGTGCAACTTCAATTATGGTCAAAAGGAGATTTAAAAGCTTTGTATCAT
CGCGTGGTTGCAACAGAAAAAACAGCAAAACTCGGTCGCTTTTCAATGGTTTGTTTTATACCGTTTCAAAGTACTCTGAT
GTATAATAAAAGAACCTACGGGAGTGTGCAAACGCATGATGTAGGATTTAATTATGCTTTATCGCATCAAGAGTTTTCCA
AATATTTTTTACCTCGTTCTTAA

Upstream 100 bases:

>100_bases
TCGATAAAATAGAGCCCCTGATATTAGAGTTTTCACACGCAGTTGAAGAAGAATATAAAATTGATGGGCTTTTAAAAGAG
GTCAAAAGCAGTAAATCTCA

Downstream 100 bases:

>100_bases
GGCTTATCCTTAAAAATCTAATCTGCGATTAAGAAATTGGATATTTTTTTAAATTTATTTAGTCAGGAGTTGATGACAAC
GTTTTAATCATGCAACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH
RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS

Sequences:

>Translated_140_residues
MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH
RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS
>Mature_140_residues
MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH
RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16059; Mature: 16059

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTV
CCCCEEEECCCCCHHHCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCCCEE
IIPAVQLQLWSKGDLKALYHRVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHD
EEEEEEEEEECCCCHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHEEECCCCCCCEEEEC
VGFNYALSHQEFSKYFLPRS
CCCEEEECHHHHHHHCCCCC
>Mature Secondary Structure
MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTV
CCCCEEEECCCCCHHHCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCCCEE
IIPAVQLQLWSKGDLKALYHRVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHD
EEEEEEEEEECCCCHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHEEECCCCCCCEEEEC
VGFNYALSHQEFSKYFLPRS
CCCEEEECHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA