| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446471
Identifier: 46446471
GI number: 46446471
Start: 1019945
End: 1020367
Strand: Direct
Name: 46446471
Synonym: pc0837
Alternate gene names: NA
Gene position: 1019945-1020367 (Clockwise)
Preceding gene: 46446470
Following gene: 46446472
Centisome position: 42.24
GC content: 36.88
Gene sequence:
>423_bases ATGGATTCTTCGTTACTTACATTATTTCGGGGACCAGCAAGAAAGGTTTGTAATTGCAGCTCCACATGTCGACAAGGTGG TTTTACTCTTCACCTTTTTGAAAGTGATGAGGGATTACAATATTGCTGTTTAAAAGAGCTGGAATGGAAAGCCATGCCTA TTGATGAAAAACAAACAGTAATCATTCCAGCCGTGCAACTTCAATTATGGTCAAAAGGAGATTTAAAAGCTTTGTATCAT CGCGTGGTTGCAACAGAAAAAACAGCAAAACTCGGTCGCTTTTCAATGGTTTGTTTTATACCGTTTCAAAGTACTCTGAT GTATAATAAAAGAACCTACGGGAGTGTGCAAACGCATGATGTAGGATTTAATTATGCTTTATCGCATCAAGAGTTTTCCA AATATTTTTTACCTCGTTCTTAA
Upstream 100 bases:
>100_bases TCGATAAAATAGAGCCCCTGATATTAGAGTTTTCACACGCAGTTGAAGAAGAATATAAAATTGATGGGCTTTTAAAAGAG GTCAAAAGCAGTAAATCTCA
Downstream 100 bases:
>100_bases GGCTTATCCTTAAAAATCTAATCTGCGATTAAGAAATTGGATATTTTTTTAAATTTATTTAGTCAGGAGTTGATGACAAC GTTTTAATCATGCAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS
Sequences:
>Translated_140_residues MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS >Mature_140_residues MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTVIIPAVQLQLWSKGDLKALYH RVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHDVGFNYALSHQEFSKYFLPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16059; Mature: 16059
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTV CCCCEEEECCCCCHHHCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCCCEE IIPAVQLQLWSKGDLKALYHRVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHD EEEEEEEEEECCCCHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHEEECCCCCCCEEEEC VGFNYALSHQEFSKYFLPRS CCCEEEECHHHHHHHCCCCC >Mature Secondary Structure MDSSLLTLFRGPARKVCNCSSTCRQGGFTLHLFESDEGLQYCCLKELEWKAMPIDEKQTV CCCCEEEECCCCCHHHCCCCHHHHCCCCEEEEEECCCCCEEEECCCCCCEECCCCCCCEE IIPAVQLQLWSKGDLKALYHRVVATEKTAKLGRFSMVCFIPFQSTLMYNKRTYGSVQTHD EEEEEEEEEECCCCHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHEEECCCCCCCEEEEC VGFNYALSHQEFSKYFLPRS CCCEEEECHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA