Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446270

Identifier: 46446270

GI number: 46446270

Start: 779863

End: 780945

Strand: Reverse

Name: 46446270

Synonym: pc0636

Alternate gene names: NA

Gene position: 780945-779863 (Counterclockwise)

Preceding gene: 46446271

Following gene: 46446269

Centisome position: 32.34

GC content: 34.53

Gene sequence:

>1083_bases
ATGTTTAGAAGCATTTGGGAAAGATATTTTGTCAGTGAATTTATTAAAGTTTTTCTTCTTTTTTTAGTTTGTTTTTATGG
TCTGTATGTTCTCATTGACTATGCAAGTCATACAAGTGCTCTTCCACATCATCATATACAGCTGCGTATACGAGAACTCA
TTCGCTATTATCTTTTTATTCTAGCGAGTCGAGCGGAAATTCTCATTCCGCTTGCTTTATTGATTGCATTTATTAAAACA
GTTTGTACTTTAAATACTCATCAAGAGTTAGTTGCTCTGATGGCAGGCGGAATCAAACTGAAAACTTTGATGCGTCCTTT
TCTTATGATTGCCTTAGCATTTGTTTGCTTACTTTATCTAAATGAACAGTTTGTTTTGCCTTCCACCCTTAAAAAATTAC
GCCATCTCGAAAACGCAACAAAGCACCAAAAAAAACGGCAATTGCCGGAAATTACCGTTAAACATGTCGTTCTAGAAGAT
AGATCTCTTTTACTTTATCAAAATTATGATAGTGAAAAAGAAGAATTTTTTGATGTGTACTGGATTGAATCGATCGATAG
TATTTATCGAGCCAAATATTTATGCCCAAATAAAGAAATACCTGTCGGTTATTTTGTTGATCATCTTTTAAGACAGCCTA
ACGGCGAACTATTACAACAACAGGCATATAGTCAATATGAATTTAAAAATTTGCTATTTAATCAAGAACTTTTGCAATCT
GCTATTTTAGATCCCGATATTTTGCCTTTAACAAATCTATTTTTTCAACAGCCCAGTCTTTTCGCCAACTTAAGTGAAAA
AGAAAGCAAAATTGCGACTGCATTTTACTGGAAACTTCTCATGCCTTGGCTTTGTCTGCTAGCGATTTTAGCACCAGCTC
CTTCTTGCGTTCGCTTTTCGCGCCAGATACCTATTTTCTTTATTTATATTTATTCTCTATTTGGCCTAATTGCTTTTTAT
ATGCTTATGGATGCGGCCCAAGTGTTAGCTAAAAGGCAAGTTCTTCCTCCTATTTGGGCTATAGGCTTACCTTTTATTCT
TGTATTCAGCTTTTATAGTTATCGCTTTGCCCGCTTGAAATAA

Upstream 100 bases:

>100_bases
AACAGTTTTATCTTTCTTTCGCTTTATATCTTTTACCTCTCATCCTAATCGATATCATTTCACTTTGGACACTCAATCGA
ATTAGCAATGGAATTGAATA

Downstream 100 bases:

>100_bases
CGATTTATCAAATGGCATGAAAATTAAAAAATAGAATTTAAAATATATTTTTACCATTAGCTATAAAATGATAATCTCAT
TTTGCTTTTCAAACAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MFRSIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILASRAEILIPLALLIAFIKT
VCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQFVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLED
RSLLLYQNYDSEKEEFFDVYWIESIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQS
AILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFSRQIPIFFIYIYSLFGLIAFY
MLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARLK

Sequences:

>Translated_360_residues
MFRSIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILASRAEILIPLALLIAFIKT
VCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQFVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLED
RSLLLYQNYDSEKEEFFDVYWIESIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQS
AILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFSRQIPIFFIYIYSLFGLIAFY
MLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARLK
>Mature_360_residues
MFRSIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILASRAEILIPLALLIAFIKT
VCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQFVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLED
RSLLLYQNYDSEKEEFFDVYWIESIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQS
AILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFSRQIPIFFIYIYSLFGLIAFY
MLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARLK

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42386; Mature: 42386

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LASRAEILIPLALLIAFIKTVCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NEQFVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLEDRSLLLYQNYDSEKEEFFDVY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
WIESIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFS
HCCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RQIPIFFIYIYSLFGLIAFYMLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRSIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LASRAEILIPLALLIAFIKTVCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NEQFVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLEDRSLLLYQNYDSEKEEFFDVY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
WIESIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFS
HCCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RQIPIFFIYIYSLFGLIAFYMLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA