Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446271

Identifier: 46446271

GI number: 46446271

Start: 780945

End: 782096

Strand: Reverse

Name: 46446271

Synonym: pc0637

Alternate gene names: NA

Gene position: 782096-780945 (Counterclockwise)

Preceding gene: 46446275

Following gene: 46446270

Centisome position: 32.39

GC content: 35.42

Gene sequence:

>1152_bases
GTGATCCCTATTTTGTGGCGTTACTCCATTAACCATTTTTTAAAAATTGTTTTCGCTTGCGTCTTTGCATTCATTTCGAT
TTTACTTACAATGCGTTTGGATGAAATCGCCAACTTCGCTGCATTAGGAGCTCCGATTTCTTACATTTTATTGTTTGCGT
TTTATCAAATACCTTATATACTTCCTATAGCACTTCCTCTTTCATGTTTGATTGCCTCTCTGATTTTTGTTCAGCGCCTT
TCTAATACACATGAATTAACAGCTTTACGTGCTTGCGGTTTTGCTTTAAAAGATCTTCTTGCGCCCATTTTATTAACAGC
CGCCTTTCTCACAATTTTCAATTTTTGGATAGTTTCCGAAGTCGCTACGCAAACTCACCTTCAAACAAATATTCTTAAAA
GTGAACTCCGTTCGATTAATCCTTTACTGCTTCTCAATAATAAGCATCTAATGAGGCTTAAAGGGCTCTATTTTGACTCT
CTAGGCCCTTCTCGGGTAGGAGAAATGGCTACCGATGCTGTTTTTGCGATTCCAAGTCAGCACCATCAAAGAATTAACTT
ATTCATTGCAAAACAACTTAAAGCATCTTCTTCTATTTTTACTGCTCAAGGAGCCACGTTGTTAACAACAACATCTCTCA
ATCAAGAGAACACTTTTGATGACTTGTTGATTGAAAATATGAAAAAATCTACTACCCATGTCGAGGATTTTTCTCAAATC
TTGCAAAAAAAAGTCTGGACTGTGAATAATGACTATCTTAAGCTCCCTTTGCTTTTAATTCGCGCTCAGGAACAGAAGCA
GGCACTTCGCCAAGCAAAATTAGAAAATAAAAAACCTGTTATTGTCAAAGATTTAAAAGGGCAATTTCATAAAAGCCTTT
CAGAAATCGCTAAACGGTCATCAATTGCTTTTGCTGTGATAAGTTTCACACTTATGGGAACTGCTTTTGGAATGAATATT
AGCCGGCAACGTAAACATAAAAATTTATTGATCGTTATAATCCTAACAACATTTTATCTGACAACTTTTTTTTTGGCTAA
GGGATTAGATCAACAGTTTTATCTTTCTTTCGCTTTATATCTTTTACCTCTCATCCTAATCGATATCATTTCACTTTGGA
CACTCAATCGAATTAGCAATGGAATTGAATAA

Upstream 100 bases:

>100_bases
ATTAATCTAGTAGGCACATCATACCAAATTGAAAAATAAATGTATAAATAACTACTTTTTAGTTTTGCCTATAAACCTCT
TCATATAGTTGGAAAAATTT

Downstream 100 bases:

>100_bases
TGTTTAGAAGCATTTGGGAAAGATATTTTGTCAGTGAATTTATTAAAGTTTTTCTTCTTTTTTTAGTTTGTTTTTATGGT
CTGTATGTTCTCATTGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAALGAPISYILLFAFYQIPYILPIALPLSCLIASLIFVQRL
SNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSEVATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDS
LGPSRVGEMATDAVFAIPSQHHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI
LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRSSIAFAVISFTLMGTAFGMNI
SRQRKHKNLLIVIILTTFYLTTFFLAKGLDQQFYLSFALYLLPLILIDIISLWTLNRISNGIE

Sequences:

>Translated_383_residues
MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAALGAPISYILLFAFYQIPYILPIALPLSCLIASLIFVQRL
SNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSEVATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDS
LGPSRVGEMATDAVFAIPSQHHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI
LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRSSIAFAVISFTLMGTAFGMNI
SRQRKHKNLLIVIILTTFYLTTFFLAKGLDQQFYLSFALYLLPLILIDIISLWTLNRISNGIE
>Mature_383_residues
MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAALGAPISYILLFAFYQIPYILPIALPLSCLIASLIFVQRL
SNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSEVATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDS
LGPSRVGEMATDAVFAIPSQHHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI
LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRSSIAFAVISFTLMGTAFGMNI
SRQRKHKNLLIVIILTTFYLTTFFLAKGLDQQFYLSFALYLLPLILIDIISLWTLNRISNGIE

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43436; Mature: 43436

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAALGAPISYILLFAFYQIPYI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPIALPLSCLIASLIFVQRLSNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDSLGPSRVGEMATDAVFAIPSQ
HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHCCCCHHHHHHHHHHHHEECCCH
HHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI
HHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
SIAFAVISFTLMGTAFGMNISRQRKHKNLLIVIILTTFYLTTFFLAKGLDQQFYLSFALY
HHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LLPLILIDIISLWTLNRISNGIE
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAALGAPISYILLFAFYQIPYI
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LPIALPLSCLIASLIFVQRLSNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDSLGPSRVGEMATDAVFAIPSQ
HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHCCCCHHHHHHHHHHHHEECCCH
HHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI
HHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
SIAFAVISFTLMGTAFGMNISRQRKHKNLLIVIILTTFYLTTFFLAKGLDQQFYLSFALY
HHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LLPLILIDIISLWTLNRISNGIE
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA