| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is folE [H]
Identifier: 46446083
GI number: 46446083
Start: 577540
End: 578214
Strand: Reverse
Name: folE [H]
Synonym: pc0449
Alternate gene names: 46446083
Gene position: 578214-577540 (Counterclockwise)
Preceding gene: 46446084
Following gene: 46446082
Centisome position: 23.95
GC content: 36.15
Gene sequence:
>675_bases ATGACAAAAAAAGAGTTCCCTCAAAAAAAAATTCCTCCTTCTATCACAAATTTTCCTTCACCGATTCGGCGACATCAAAA GCGCTTGTCGGATCAAGATAAAATAAAGCTAATTGCTGAACATTTTAAAGCCATCATGGAGACACTTGAGCTTGATGTGG AAGATGAATCTTTAGCTCGTACCCCAGAACGAGTAGCCAAAATGTACGTTAATGAAATTTTTTCGGGATTAGATGAAGAA AATTTTCCTGAAATAAGTTTTTTCAAAGATGAAATTCATCACGAACATAAAGCCAATATGGTTTTTGTTAAAGTCGGCTT TACAAGTTTTTGTGAGCATCACTTTGTTCCCATGTCAGGTTTTGCTTATGTTGCCTATATCCCTACAAATCAATTAATTG GGTTATCTAAAATTCCTCGGCTGGTGCGATATTTTGCTAAAAGGCCTCAATTACAAGAAAGATTAACTGCTCAAATTGCT GACTCTTTAGCCCTTCTTTTAAATACTGAGCATGTCGCCGTCTCTTTGACAGCGATTCATTCTTGTGTTCAGGCTAGAGG AATTCAAGATGAATGTAGCCATACGATTACAAATGTTTTACGAGGTCAATTCGGAGCTGATGGAAATTTAAGACGTGAGT TTTTTGAAGGAATCAATCGAAGAGTTTTTGAATAA
Upstream 100 bases:
>100_bases AATGCTTTCGCTATTACGGCAGGTGAAATCTATCGTCAAAGGAAAACTGCGAAAATTTATGAATACCTTGCCTTAGAACC TAATAATGAGTAAAAAATTC
Downstream 100 bases:
>100_bases AAAAAATTATTGGATTAATATGAATTAAAATTAAAAGAAATTCTTATTAAATAAATAACAAATCCAGATAGAGGAAAAAA TGTCTACATCAATATTGTCC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTKKEFPQKKIPPSITNFPSPIRRHQKRLSDQDKIKLIAEHFKAIMETLELDVEDESLARTPERVAKMYVNEIFSGLDEE NFPEISFFKDEIHHEHKANMVFVKVGFTSFCEHHFVPMSGFAYVAYIPTNQLIGLSKIPRLVRYFAKRPQLQERLTAQIA DSLALLLNTEHVAVSLTAIHSCVQARGIQDECSHTITNVLRGQFGADGNLRREFFEGINRRVFE
Sequences:
>Translated_224_residues MTKKEFPQKKIPPSITNFPSPIRRHQKRLSDQDKIKLIAEHFKAIMETLELDVEDESLARTPERVAKMYVNEIFSGLDEE NFPEISFFKDEIHHEHKANMVFVKVGFTSFCEHHFVPMSGFAYVAYIPTNQLIGLSKIPRLVRYFAKRPQLQERLTAQIA DSLALLLNTEHVAVSLTAIHSCVQARGIQDECSHTITNVLRGQFGADGNLRREFFEGINRRVFE >Mature_223_residues TKKEFPQKKIPPSITNFPSPIRRHQKRLSDQDKIKLIAEHFKAIMETLELDVEDESLARTPERVAKMYVNEIFSGLDEEN FPEISFFKDEIHHEHKANMVFVKVGFTSFCEHHFVPMSGFAYVAYIPTNQLIGLSKIPRLVRYFAKRPQLQERLTAQIAD SLALLLNTEHVAVSLTAIHSCVQARGIQDECSHTITNVLRGQFGADGNLRREFFEGINRRVFE
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=179, Percent_Identity=34.6368715083799, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI4503949, Length=179, Percent_Identity=34.6368715083799, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI66932970, Length=152, Percent_Identity=32.8947368421053, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI66932972, Length=145, Percent_Identity=33.1034482758621, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1788476, Length=200, Percent_Identity=49, Blast_Score=185, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17560486, Length=203, Percent_Identity=34.9753694581281, Blast_Score=120, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6321706, Length=189, Percent_Identity=38.6243386243386, Blast_Score=118, Evalue=9e-28, Organism=Drosophila melanogaster, GI24656791, Length=187, Percent_Identity=35.2941176470588, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24656796, Length=187, Percent_Identity=35.2941176470588, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24656782, Length=187, Percent_Identity=35.2941176470588, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 25814; Mature: 25683
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKEFPQKKIPPSITNFPSPIRRHQKRLSDQDKIKLIAEHFKAIMETLELDVEDESLAR CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC TPERVAKMYVNEIFSGLDEENFPEISFFKDEIHHEHKANMVFVKVGFTSFCEHHFVPMSG CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCC FAYVAYIPTNQLIGLSKIPRLVRYFAKRPQLQERLTAQIADSLALLLNTEHVAVSLTAIH CEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SCVQARGIQDECSHTITNVLRGQFGADGNLRREFFEGINRRVFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TKKEFPQKKIPPSITNFPSPIRRHQKRLSDQDKIKLIAEHFKAIMETLELDVEDESLAR CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC TPERVAKMYVNEIFSGLDEENFPEISFFKDEIHHEHKANMVFVKVGFTSFCEHHFVPMSG CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCC FAYVAYIPTNQLIGLSKIPRLVRYFAKRPQLQERLTAQIADSLALLLNTEHVAVSLTAIH CEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SCVQARGIQDECSHTITNVLRGQFGADGNLRREFFEGINRRVFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA