Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446082

Identifier: 46446082

GI number: 46446082

Start: 576786

End: 577460

Strand: Reverse

Name: 46446082

Synonym: pc0448

Alternate gene names: NA

Gene position: 577460-576786 (Counterclockwise)

Preceding gene: 46446083

Following gene: 46446081

Centisome position: 23.92

GC content: 33.63

Gene sequence:

>675_bases
ATGTCTACATCAATATTGTCCTCATCTCGTGTGTTTACCACAATAAATTATTATAAGGATCAAGTCACAAACTACCAAAT
TGATGTATTAGTGGAATATTCAAAAATTACTGATATTAAACAAATTGCTCGCGGAGCTATTTATGGAGTAACAGCAATAG
GAACAGGTTTAGGATGCGCTACTTTAGTCTTAGGCTCTTCTAAAGTATTTCAAATACTTAAGCCTCTATTCAATCCTACA
TTCTCTCTTATTCCAGCAACGCAAAAAACTTTTATTAAAATTTTATATATTCCCGTACTTATTTATTACATATTTTCTAT
GTGCGTAGCTACTCCCATTCTAGAAGAGATCATTTTTAGGGATTTAATACAAACAAAATTACTTAAAAACAAAGTAACAC
CTTTTTTAAAAAACCATTGTCCAAGCCTAGCTCAGTCTCAAACAGCTTTAAAAATCTCTCGAATCTTTTTCACTTCAATT
TTATTTGCTCTTGCTCATGCTCCTCAAAATGGATTGCAACTTTTCCCTTTCCATCAGTTTGGAGCAGGGCTCATTTTTGG
AATCGCCAAAGAGCGAGATGGGCTTTTTTCAGCAACAATAGCTCATTCTACATCCAATTTTATGGTTCTCATGTTACCTC
AAATAGCTATCGTTCGTCACATTTACTTCCGCTAA

Upstream 100 bases:

>100_bases
AATCGAAGAGTTTTTGAATAAAAAAAATTATTGGATTAATATGAATTAAAATTAAAAGAAATTCTTATTAAATAAATAAC
AAATCCAGATAGAGGAAAAA

Downstream 100 bases:

>100_bases
ATAAGTAAATTAAAGGATTGTTTATTCTTTGAGGATAAAAAAAGTCTGGGAAGATATTAAGCCGGATTCTGTCGACTAAC
AAAAAAGTTAGCCTAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSTSILSSSRVFTTINYYKDQVTNYQIDVLVEYSKITDIKQIARGAIYGVTAIGTGLGCATLVLGSSKVFQILKPLFNPT
FSLIPATQKTFIKILYIPVLIYYIFSMCVATPILEEIIFRDLIQTKLLKNKVTPFLKNHCPSLAQSQTALKISRIFFTSI
LFALAHAPQNGLQLFPFHQFGAGLIFGIAKERDGLFSATIAHSTSNFMVLMLPQIAIVRHIYFR

Sequences:

>Translated_224_residues
MSTSILSSSRVFTTINYYKDQVTNYQIDVLVEYSKITDIKQIARGAIYGVTAIGTGLGCATLVLGSSKVFQILKPLFNPT
FSLIPATQKTFIKILYIPVLIYYIFSMCVATPILEEIIFRDLIQTKLLKNKVTPFLKNHCPSLAQSQTALKISRIFFTSI
LFALAHAPQNGLQLFPFHQFGAGLIFGIAKERDGLFSATIAHSTSNFMVLMLPQIAIVRHIYFR
>Mature_223_residues
STSILSSSRVFTTINYYKDQVTNYQIDVLVEYSKITDIKQIARGAIYGVTAIGTGLGCATLVLGSSKVFQILKPLFNPTF
SLIPATQKTFIKILYIPVLIYYIFSMCVATPILEEIIFRDLIQTKLLKNKVTPFLKNHCPSLAQSQTALKISRIFFTSIL
FALAHAPQNGLQLFPFHQFGAGLIFGIAKERDGLFSATIAHSTSNFMVLMLPQIAIVRHIYFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25067; Mature: 24936

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSILSSSRVFTTINYYKDQVTNYQIDVLVEYSKITDIKQIARGAIYGVTAIGTGLGCA
CCCCCCCCCCCEEHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TLVLGSSKVFQILKPLFNPTFSLIPATQKTFIKILYIPVLIYYIFSMCVATPILEEIIFR
HHHHCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLIQTKLLKNKVTPFLKNHCPSLAQSQTALKISRIFFTSILFALAHAPQNGLQLFPFHQF
HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHH
GAGLIFGIAKERDGLFSATIAHSTSNFMVLMLPQIAIVRHIYFR
CCHHHEEEHHCCCCCEEHHHHHCCCCEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
STSILSSSRVFTTINYYKDQVTNYQIDVLVEYSKITDIKQIARGAIYGVTAIGTGLGCA
CCCCCCCCCCEEHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TLVLGSSKVFQILKPLFNPTFSLIPATQKTFIKILYIPVLIYYIFSMCVATPILEEIIFR
HHHHCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLIQTKLLKNKVTPFLKNHCPSLAQSQTALKISRIFFTSILFALAHAPQNGLQLFPFHQF
HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHH
GAGLIFGIAKERDGLFSATIAHSTSNFMVLMLPQIAIVRHIYFR
CCHHHEEEHHCCCCCEEHHHHHCCCCEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA