Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446030

Identifier: 46446030

GI number: 46446030

Start: 529521

End: 530648

Strand: Reverse

Name: 46446030

Synonym: pc0396

Alternate gene names: NA

Gene position: 530648-529521 (Counterclockwise)

Preceding gene: 46446031

Following gene: 161611309

Centisome position: 21.98

GC content: 32.89

Gene sequence:

>1128_bases
ATGACAGTTTCCATAAATATATACCCTTTAACATATAAAATTTTATTTCTTGTTATGAAAAAAACTATCTTTATTGCTTC
TCTTTCTTTCTTTTTAACTTTTTACGCGCTAGAAGCAATTAAATCGGACGACTTCCTTTCTTCTTCTCGTACTGAAGAAT
CTAAAATTTTTATTAATAATCGAATTCTAGCAAGAATTAACGGTAAACCTATTTCTGCCTATGATCTTGTCAAAAAAATG
GATGTCACCTTCTATAAACAATTTCCCCAATATCTTTCTTCTACTGAAGCTCGCTACCAATATTATCAATTTAGTTGGAA
ATATGCTTTGGAAGATTTAATCAATAAAGAACTTATTTTAGCTGATGCCCAAGAAAGTAAAGTTGAGGTTACTAGTGGAG
ATGTTCGACAAGAAATGGAACTCATGTTTGGCCCTAACATTATTGCGAGTTTAGATAAAATTGGTTTATCTTTTGAGGAA
GCTTCAAAAATTGTTCAAGGTGATATCCTTTTAAAGCGTATGATCGGTGCCAGGGTCAATGGTAAAGCTATTCGTCAAGT
CACACCCTCCAGGGTCCGTAAAAGCTATGAAGATTTTATTAAAGATCCAGCAAATATCCGATTGACTATCTGGAACTATA
AAGTTTTGACAATTAAAGATCGTAATCTCAAAAAATCTGAAGAAATCGCCCAGGCTGCTTATCAACTTCTTAGAAAGGGT
TTTTCAATTGAAGAAGTTCCTGCTAAATTAAAAGAAGGGAAATTGCTTGGTCGCAAAGGAAAAGTAACTGTTTCAAAGGT
AATCCATAACAATGAAAAAGAACTTTCTAAGTCCTATCAACAAATTTTAAATCCTTTAGATACAGGAATGTATAGCCTAC
CTTTCGAAAATAAAAGTCGCGTTGAGCATACCACTGTCTATCGAATTTTATTTGTTCAAGAAAAAATTCCTGGTGGTTAC
CCTTCCTTTAAAGAAATGGAACCTGTTTTAAAGGAACGACTTTTAAATCAAGTGGCTGATGAAGAGACTGACTTATACCT
CAAAAAATTACGAGAACATTTTTACGTCAGAGATAAAGACTTAGAAGCAATGGTTCCTGCTGACTATCAACCTTTTGTTT
TAAAATAA

Upstream 100 bases:

>100_bases
TCTCGAAGTGGAAGGAGAAATATTCCAAACAATCCCAGCTCAGGGGGAAATGGACGGTTTTTTTGGAGTTGTTCTTAAAA
GAGCATAACTCTATCATATA

Downstream 100 bases:

>100_bases
GCAAATTTATGCCTATTTATAAACCCAGCGAATTACGCCTTTTTTTAAATCAACTTGGAATTTTCCCCAAAAAAGGACTT
TCTCAAAATTTTTTGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTVSINIYPLTYKILFLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINNRILARINGKPISAYDLVKKM
DVTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELILADAQESKVEVTSGDVRQEMELMFGPNIIASLDKIGLSFEE
ASKIVQGDILLKRMIGARVNGKAIRQVTPSRVRKSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKG
FSIEEVPAKLKEGKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSRVEHTTVYRILFVQEKIPGGY
PSFKEMEPVLKERLLNQVADEETDLYLKKLREHFYVRDKDLEAMVPADYQPFVLK

Sequences:

>Translated_375_residues
MTVSINIYPLTYKILFLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINNRILARINGKPISAYDLVKKM
DVTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELILADAQESKVEVTSGDVRQEMELMFGPNIIASLDKIGLSFEE
ASKIVQGDILLKRMIGARVNGKAIRQVTPSRVRKSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKG
FSIEEVPAKLKEGKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSRVEHTTVYRILFVQEKIPGGY
PSFKEMEPVLKERLLNQVADEETDLYLKKLREHFYVRDKDLEAMVPADYQPFVLK
>Mature_374_residues
TVSINIYPLTYKILFLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINNRILARINGKPISAYDLVKKMD
VTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELILADAQESKVEVTSGDVRQEMELMFGPNIIASLDKIGLSFEEA
SKIVQGDILLKRMIGARVNGKAIRQVTPSRVRKSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKGF
SIEEVPAKLKEGKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSRVEHTTVYRILFVQEKIPGGYP
SFKEMEPVLKERLLNQVADEETDLYLKKLREHFYVRDKDLEAMVPADYQPFVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_1058/CT_355/TC_0634 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008880 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43508; Mature: 43377

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSINIYPLTYKILFLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINN
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
RILARINGKPISAYDLVKKMDVTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELIL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ADAQESKVEVTSGDVRQEMELMFGPNIIASLDKIGLSFEEASKIVQGDILLKRMIGARVN
ECCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GKAIRQVTPSRVRKSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKG
CHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCC
FSIEEVPAKLKEGKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSR
CCHHHHHHHHHCCCCCCCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCC
VEHTTVYRILFVQEKIPGGYPSFKEMEPVLKERLLNQVADEETDLYLKKLREHFYVRDKD
CHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
LEAMVPADYQPFVLK
CCEECCCCCCCCEEC
>Mature Secondary Structure 
TVSINIYPLTYKILFLVMKKTIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINN
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
RILARINGKPISAYDLVKKMDVTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELIL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
ADAQESKVEVTSGDVRQEMELMFGPNIIASLDKIGLSFEEASKIVQGDILLKRMIGARVN
ECCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GKAIRQVTPSRVRKSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKG
CHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCC
FSIEEVPAKLKEGKLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSR
CCHHHHHHHHHCCCCCCCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCC
VEHTTVYRILFVQEKIPGGYPSFKEMEPVLKERLLNQVADEETDLYLKKLREHFYVRDKD
CHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
LEAMVPADYQPFVLK
CCEECCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]