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The map label for this gene is capD [H]

Identifier: 46445983

GI number: 46445983

Start: 475156

End: 476184

Strand: Reverse

Name: capD [H]

Synonym: pc0349

Alternate gene names: 46445983

Gene position: 476184-475156 (Counterclockwise)

Preceding gene: 46445992

Following gene: 46445981

Centisome position: 19.72

GC content: 38.58

Gene sequence:

>1029_bases
ATGCATTCAGTATTTACAGATCAAACAATTTTAATCACGGGTGGATCAGGTAGTTTTGGTCGAGCTTTAACTAAGAAAAT
TTTAAAAGAAAACAGTTGCCGCAAAGTCATTATCTTTAGTCGAGATGAATGGAAACAGTGGGAGATGCGACGAAGTGATC
CTCTTTTTGACCATCCTAAAATTCGCTATTTTTTAGGAGATGTTCGTGATTCTCAAAGGCTTGCACGTGCTTTTAGAGAT
GTTACAATGATTGTCCATGCAGCGGCACTAAAACAGGTTCCTGCTGCTGAATATAATCCTTCAGAATTTATTAAAACTAA
TGTCATAGGAGCCATGAATGTCATTGACGCAGCGATCAATTGTGGCATTCAAAAAGTAATTGCTCTTTCCACAGATAAAG
CTGTTAATCCAATCAATTTATACGGAGCAACTAAACTCTGTTCAGATAAACTATTTCTAGCTGGTAATTCTTATGTTGGT
GCACAAGGTTATCCCATTTTTTCAGTGGTTCGGTATGGTAATGTCGCCGCCAGTCGAGGTAGTATTCTTCCTTTTTGGCA
AAAGTTAATCGAACAAGGAGCCAAATCCTTACCTATAACAGATGAGCGAATGACTCGTTTCTGGATCACCTTGGAACAAT
CAGTCGACTTTGTCACTAACTGCTTTTATAAAATGAGAGGAGGGGAAATTTTCGTTCCTAAAATTCCAAGCGTTAAAATT
GTCGATCTAGCTGAAGCTTTAGCTCCTGGCTTAACCAAAGAAATTTGCGGTATTCGGCCAGGAGAAAAGCTCCATGAATT
GATGGTCAGTTCTGATGATGTACGCCATACAGTAGAATTTGAACGTTATTACTTAATCGCACCGGAACCCATTTCTGAAA
CAGATGAACGCATTCCTTCTAATCACAAAAGTTGCCCCATCAGGGGAAAACCAGTTCACCCTGATTTCATTTATGCATCA
CATACAAATTCTGAATGGCTAACAGTTGAACAAATCCAGCAATTCATTAAAAGCTCTCCACTTATATAA

Upstream 100 bases:

>100_bases
TTAATTTTGGCTTAGAAACCTTTGAGCTTTCACATTGCCCAAAAACTCATTTTTCAGGTTTACTTAGCCATTACAAAATA
ATACCGTAGGATATAGCTTT

Downstream 100 bases:

>100_bases
AAGCGAAAAATTTTTAACTCTAAATCATTTTAAGTAGAGAGTTTCATTGAATCATAATAAATGAAAAGAAGTTTCAAAAT
TAAAGTTTTGTCTAATCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MHSVFTDQTILITGGSGSFGRALTKKILKENSCRKVIIFSRDEWKQWEMRRSDPLFDHPKIRYFLGDVRDSQRLARAFRD
VTMIVHAAALKQVPAAEYNPSEFIKTNVIGAMNVIDAAINCGIQKVIALSTDKAVNPINLYGATKLCSDKLFLAGNSYVG
AQGYPIFSVVRYGNVAASRGSILPFWQKLIEQGAKSLPITDERMTRFWITLEQSVDFVTNCFYKMRGGEIFVPKIPSVKI
VDLAEALAPGLTKEICGIRPGEKLHELMVSSDDVRHTVEFERYYLIAPEPISETDERIPSNHKSCPIRGKPVHPDFIYAS
HTNSEWLTVEQIQQFIKSSPLI

Sequences:

>Translated_342_residues
MHSVFTDQTILITGGSGSFGRALTKKILKENSCRKVIIFSRDEWKQWEMRRSDPLFDHPKIRYFLGDVRDSQRLARAFRD
VTMIVHAAALKQVPAAEYNPSEFIKTNVIGAMNVIDAAINCGIQKVIALSTDKAVNPINLYGATKLCSDKLFLAGNSYVG
AQGYPIFSVVRYGNVAASRGSILPFWQKLIEQGAKSLPITDERMTRFWITLEQSVDFVTNCFYKMRGGEIFVPKIPSVKI
VDLAEALAPGLTKEICGIRPGEKLHELMVSSDDVRHTVEFERYYLIAPEPISETDERIPSNHKSCPIRGKPVHPDFIYAS
HTNSEWLTVEQIQQFIKSSPLI
>Mature_342_residues
MHSVFTDQTILITGGSGSFGRALTKKILKENSCRKVIIFSRDEWKQWEMRRSDPLFDHPKIRYFLGDVRDSQRLARAFRD
VTMIVHAAALKQVPAAEYNPSEFIKTNVIGAMNVIDAAINCGIQKVIALSTDKAVNPINLYGATKLCSDKLFLAGNSYVG
AQGYPIFSVVRYGNVAASRGSILPFWQKLIEQGAKSLPITDERMTRFWITLEQSVDFVTNCFYKMRGGEIFVPKIPSVKI
VDLAEALAPGLTKEICGIRPGEKLHELMVSSDDVRHTVEFERYYLIAPEPISETDERIPSNHKSCPIRGKPVHPDFIYAS
HTNSEWLTVEQIQQFIKSSPLI

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 38498; Mature: 38498

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSVFTDQTILITGGSGSFGRALTKKILKENSCRKVIIFSRDEWKQWEMRRSDPLFDHPK
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCC
IRYFLGDVRDSQRLARAFRDVTMIVHAAALKQVPAAEYNPSEFIKTNVIGAMNVIDAAIN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
CGIQKVIALSTDKAVNPINLYGATKLCSDKLFLAGNSYVGAQGYPIFSVVRYGNVAASRG
CCHHHEEEECCCCCCCCEEECCCHHHHCCCEEEECCCEECCCCCCHHHHHHHCCCCCCCC
SILPFWQKLIEQGAKSLPITDERMTRFWITLEQSVDFVTNCFYKMRGGEIFVPKIPSVKI
CCCHHHHHHHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCEEH
VDLAEALAPGLTKEICGIRPGEKLHELMVSSDDVRHTVEFERYYLIAPEPISETDERIPS
HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCHHEEEEEEEEEEECCCCCCHHHHHCCC
NHKSCPIRGKPVHPDFIYASHTNSEWLTVEQIQQFIKSSPLI
CCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MHSVFTDQTILITGGSGSFGRALTKKILKENSCRKVIIFSRDEWKQWEMRRSDPLFDHPK
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCC
IRYFLGDVRDSQRLARAFRDVTMIVHAAALKQVPAAEYNPSEFIKTNVIGAMNVIDAAIN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
CGIQKVIALSTDKAVNPINLYGATKLCSDKLFLAGNSYVGAQGYPIFSVVRYGNVAASRG
CCHHHEEEECCCCCCCCEEECCCHHHHCCCEEEECCCEECCCCCCHHHHHHHCCCCCCCC
SILPFWQKLIEQGAKSLPITDERMTRFWITLEQSVDFVTNCFYKMRGGEIFVPKIPSVKI
CCCHHHHHHHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCEEH
VDLAEALAPGLTKEICGIRPGEKLHELMVSSDDVRHTVEFERYYLIAPEPISETDERIPS
HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCHHEEEEEEEEEEECCCCCCHHHHHCCC
NHKSCPIRGKPVHPDFIYASHTNSEWLTVEQIQQFIKSSPLI
CCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA